Analysis of interatomic Contacts of Structural Units in PDB entry:
6HK1

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6HK1 entry

There are 6 chains in PDB entry 6HK1 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	LYS 261
B	LYS 4	LYS 261
C	LYS 4	ASN 260
D	MET 1	LYS 261
E	MET 1	LYS 261
F	TYR 3	GLY 38

There are 71 helices in PDB entry 6HK1. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	9	28	Right-handed alpha
Helix 2	AA2	A	38	50	Right-handed alpha
Helix 3	AA3	A	84	91	Right-handed alpha
Helix 4	AA4	A	110	123	Right-handed alpha
Helix 5	AA5	A	151	157	Right-handed alpha
Helix 6	AA6	A	174	177	Right-handed 310
Helix 7	AA7	A	178	188	Right-handed alpha
Helix 8	AA8	A	189	192	Right-handed 310
Helix 9	AA9	A	202	208	Right-handed alpha
Helix 10	AB1	A	209	214	Right-handed alpha
Helix 11	AB2	A	225	232	Right-handed alpha
Helix 12	AB3	A	241	259	Right-handed alpha
Helix 13	AB4	B	9	28	Right-handed alpha
Helix 14	AB5	B	38	50	Right-handed alpha
Helix 15	AB6	B	84	91	Right-handed alpha
Helix 16	AB7	B	110	123	Right-handed alpha
Helix 17	AB8	B	151	157	Right-handed alpha
Helix 18	AB9	B	174	177	Right-handed 310
Helix 19	AC1	B	178	188	Right-handed alpha
Helix 20	AC2	B	189	192	Right-handed 310
Helix 21	AC3	B	202	208	Right-handed alpha
Helix 22	AC4	B	209	214	Right-handed alpha
Helix 23	AC5	B	225	232	Right-handed alpha
Helix 24	AC6	B	241	260	Right-handed alpha
Helix 25	AC7	C	9	28	Right-handed alpha
Helix 26	AC8	C	38	50	Right-handed alpha
Helix 27	AC9	C	84	91	Right-handed alpha
Helix 28	AD1	C	110	124	Right-handed alpha
Helix 29	AD2	C	151	157	Right-handed alpha
Helix 30	AD3	C	174	177	Right-handed 310
Helix 31	AD4	C	178	188	Right-handed alpha
Helix 32	AD5	C	189	192	Right-handed 310
Helix 33	AD6	C	202	208	Right-handed alpha
Helix 34	AD7	C	209	214	Right-handed alpha
Helix 35	AD8	C	225	232	Right-handed alpha
Helix 36	AD9	C	241	260	Right-handed alpha
Helix 37	AE1	D	9	28	Right-handed alpha
Helix 38	AE2	D	38	50	Right-handed alpha
Helix 39	AE3	D	84	91	Right-handed alpha
Helix 40	AE4	D	110	124	Right-handed alpha
Helix 41	AE5	D	151	157	Right-handed alpha
Helix 42	AE6	D	178	188	Right-handed alpha
Helix 43	AE7	D	189	192	Right-handed 310
Helix 44	AE8	D	202	208	Right-handed alpha
Helix 45	AE9	D	209	214	Right-handed alpha
Helix 46	AF1	D	225	232	Right-handed alpha
Helix 47	AF2	D	241	260	Right-handed alpha
Helix 48	AF3	E	9	28	Right-handed alpha
Helix 49	AF4	E	38	50	Right-handed alpha
Helix 50	AF5	E	84	91	Right-handed alpha
Helix 51	AF6	E	110	123	Right-handed alpha
Helix 52	AF7	E	151	156	Right-handed alpha
Helix 53	AF8	E	174	177	Right-handed 310
Helix 54	AF9	E	178	188	Right-handed alpha
Helix 55	AG1	E	189	192	Right-handed 310
Helix 56	AG2	E	202	208	Right-handed alpha
Helix 57	AG3	E	209	214	Right-handed alpha
Helix 58	AG4	E	225	232	Right-handed alpha
Helix 59	AG5	E	241	260	Right-handed alpha
Helix 60	AG6	F	9	28	Right-handed alpha
Helix 61	AG7	F	38	50	Right-handed alpha
Helix 62	AG8	F	84	91	Right-handed alpha
Helix 63	AG9	F	110	123	Right-handed alpha
Helix 64	AH1	F	151	157	Right-handed alpha
Helix 65	AH2	F	174	177	Right-handed 310
Helix 66	AH3	F	178	188	Right-handed alpha
Helix 67	AH4	F	189	192	Right-handed 310
Helix 68	AH5	F	202	208	Right-handed alpha
Helix 69	AH6	F	209	214	Right-handed alpha
Helix 70	AH7	F	225	232	Right-handed alpha
Helix 71	AH8	F	241	259	Right-handed alpha

There are 18 sheets in PDB entry 6HK1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	126	128	first strand
Strand 2	A	55	58	parallel
Strand 3	A	29	35	parallel
Strand 4	A	163	172	parallel
Strand 5	A	142	150	anti-parallel
Strand 6	A	131	139	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	126	128	first strand
Strand 2	A	55	58	parallel
Strand 3	A	29	35	parallel
Strand 4	A	163	172	parallel
Strand 5	A	221	223	parallel
Strand 6	A	215	218	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	77	81	first strand
Strand 2	A	104	108	anti-parallel
Strand 3	A	96	97	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	126	128	first strand
Strand 2	B	55	58	parallel
Strand 3	B	29	35	parallel
Strand 4	B	163	172	parallel
Strand 5	B	142	150	anti-parallel
Strand 6	B	131	139	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	126	128	first strand
Strand 2	B	55	58	parallel
Strand 3	B	29	35	parallel
Strand 4	B	163	172	parallel
Strand 5	B	221	223	parallel
Strand 6	B	215	218	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	77	81	first strand
Strand 2	B	104	108	anti-parallel
Strand 3	B	96	97	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	126	128	first strand
Strand 2	C	55	58	parallel
Strand 3	C	29	35	parallel
Strand 4	C	163	172	parallel
Strand 5	C	142	150	anti-parallel
Strand 6	C	131	139	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	126	128	first strand
Strand 2	C	55	58	parallel
Strand 3	C	29	35	parallel
Strand 4	C	163	172	parallel
Strand 5	C	221	223	parallel
Strand 6	C	215	218	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	77	81	first strand
Strand 2	C	104	108	anti-parallel
Strand 3	C	96	97	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	126	128	first strand
Strand 2	D	55	58	parallel
Strand 3	D	29	35	parallel
Strand 4	D	163	172	parallel
Strand 5	D	142	150	anti-parallel
Strand 6	D	131	139	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	126	128	first strand
Strand 2	D	55	58	parallel
Strand 3	D	29	35	parallel
Strand 4	D	163	172	parallel
Strand 5	D	221	223	parallel
Strand 6	D	215	218	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	77	81	first strand
Strand 2	D	104	108	anti-parallel
Strand 3	D	96	97	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	126	128	first strand
Strand 2	E	55	58	parallel
Strand 3	E	29	35	parallel
Strand 4	E	163	172	parallel
Strand 5	E	142	150	anti-parallel
Strand 6	E	131	139	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	126	128	first strand
Strand 2	E	55	58	parallel
Strand 3	E	29	35	parallel
Strand 4	E	163	172	parallel
Strand 5	E	221	223	parallel
Strand 6	E	215	218	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	77	81	first strand
Strand 2	E	104	108	anti-parallel
Strand 3	E	96	97	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	126	128	first strand
Strand 2	F	55	58	parallel
Strand 3	F	29	35	parallel
Strand 4	F	163	172	parallel
Strand 5	F	142	150	anti-parallel
Strand 6	F	131	139	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	126	128	first strand
Strand 2	F	55	58	parallel
Strand 3	F	29	35	parallel
Strand 4	F	163	172	parallel
Strand 5	F	221	223	parallel
Strand 6	F	215	218	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	77	81	first strand
Strand 2	F	104	108	anti-parallel
Strand 3	F	96	97	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6HK1

Analysis of interatomic Contacts of Structural Units in PDB entry:
6HK1