Analysis of interatomic Contacts of Structural Units in PDB entry:
6HKY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6HKY entry

There are 3 chains in PDB entry 6HKY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 16GLU 364
B
 LYS 17GLU 364
C
 LYS 17PRO 363
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 6HKY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
29 35Right-handed alpha
Helix 2
AA2
A
77 95Right-handed alpha
Helix 3
AA3
A
110 116Right-handed alpha
Helix 4
AA4
A
120 124Right-handed 310
Helix 5
AA5
A
134 148Right-handed alpha
Helix 6
AA6
A
206 208Right-handed 310
Helix 7
AA7
A
209 228Right-handed alpha
Helix 8
AA8
A
230 235Right-handed alpha
Helix 9
AA9
A
289 304Right-handed alpha
Helix 10
AB1
A
310 313Right-handed 310
Helix 11
AB2
A
314 320Right-handed alpha
Helix 12
AB3
A
321 324Right-handed 310
Helix 13
AB4
A
339 341Right-handed 310
Helix 14
AB5
A
342 356Right-handed alpha
Helix 15
AB6
B
29 35Right-handed alpha
Helix 16
AB7
B
77 95Right-handed alpha
Helix 17
AB8
B
110 116Right-handed alpha
Helix 18
AB9
B
120 124Right-handed 310
Helix 19
AC1
B
134 148Right-handed alpha
Helix 20
AC2
B
206 208Right-handed 310
Helix 21
AC3
B
209 228Right-handed alpha
Helix 22
AC4
B
230 235Right-handed alpha
Helix 23
AC5
B
289 304Right-handed alpha
Helix 24
AC6
B
310 313Right-handed 310
Helix 25
AC7
B
314 320Right-handed alpha
Helix 26
AC8
B
321 324Right-handed 310
Helix 27
AC9
B
339 341Right-handed 310
Helix 28
AD1
B
342 356Right-handed alpha
Helix 29
AD2
B
357 359Right-handed 310
Helix 30
AD3
C
29 35Right-handed alpha
Helix 31
AD4
C
77 95Right-handed alpha
Helix 32
AD5
C
110 116Right-handed alpha
Helix 33
AD6
C
134 149Right-handed alpha
Helix 34
AD7
C
206 208Right-handed 310
Helix 35
AD8
C
209 228Right-handed alpha
Helix 36
AD9
C
230 235Right-handed alpha
Helix 37
AE1
C
291 301Right-handed alpha
Helix 38
AE2
C
310 313Right-handed 310
Helix 39
AE3
C
314 320Right-handed alpha
Helix 40
AE4
C
321 324Right-handed 310
Helix 41
AE5
C
339 341Right-handed 310
Helix 42
AE6
C
342 356Right-handed alpha
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There are 13 sheets in PDB entry 6HKY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
17 18first strand
Strand 2
A
360 361anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 72first strand
Strand 2
A
20 25parallel
Strand 3
A
329 336parallel
Strand 4
A
98 105parallel
Strand 5
A
256 265parallel
Strand 6
A
236 246anti-parallel
Strand 7
A
153 164anti-parallel
Strand 8
A
167 170anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 72first strand
Strand 2
A
20 25parallel
Strand 3
A
329 336parallel
Strand 4
A
98 105parallel
Strand 5
A
256 265parallel
Strand 6
A
236 246anti-parallel
Strand 7
A
153 164anti-parallel
Strand 8
A
202 204anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
41 44first strand
Strand 2
A
49 53anti-parallel
Strand 3
A
63 67anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
183 186first strand
Strand 2
A
194 197anti-parallel
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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
70 72first strand
Strand 2
B
20 25parallel
Strand 3
B
329 336parallel
Strand 4
B
98 105parallel
Strand 5
B
257 265parallel
Strand 6
B
236 245anti-parallel
Strand 7
B
154 164anti-parallel
Strand 8
B
167 170anti-parallel
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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
70 72first strand
Strand 2
B
20 25parallel
Strand 3
B
329 336parallel
Strand 4
B
98 105parallel
Strand 5
B
257 265parallel
Strand 6
B
236 245anti-parallel
Strand 7
B
154 164anti-parallel
Strand 8
B
202 204anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
41 44first strand
Strand 2
B
49 53anti-parallel
Strand 3
B
63 67anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
183 186first strand
Strand 2
B
194 197anti-parallel
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There are 8 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
70 72first strand
Strand 2
C
19 25parallel
Strand 3
C
330 336parallel
Strand 4
C
98 105parallel
Strand 5
C
254 265parallel
Strand 6
C
236 248anti-parallel
Strand 7
C
153 164anti-parallel
Strand 8
C
167 170anti-parallel
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There are 8 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
70 72first strand
Strand 2
C
19 25parallel
Strand 3
C
330 336parallel
Strand 4
C
98 105parallel
Strand 5
C
254 265parallel
Strand 6
C
236 248anti-parallel
Strand 7
C
153 164anti-parallel
Strand 8
C
202 203anti-parallel
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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
41 44first strand
Strand 2
C
49 53anti-parallel
Strand 3
C
63 67anti-parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
183 186first strand
Strand 2
C
194 197anti-parallel
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