Analysis of interatomic Contacts of Structural Units in PDB entry:
6HLU

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6HLU entry

There are 2 chains in PDB entry 6HLU (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 2	GLU 940
B	SER 2	GLU 940

There are 78 helices in PDB entry 6HLU. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	3	14	Right-handed alpha
Helix 2	AA2	A	55	62	Right-handed alpha
Helix 3	AA3	A	78	84	Right-handed 310
Helix 4	AA4	A	100	106	Right-handed 310
Helix 5	AA5	A	122	128	Right-handed 310
Helix 6	AA6	A	144	148	Right-handed 310
Helix 7	AA7	A	166	172	Right-handed 310
Helix 8	AA8	A	188	193	Right-handed 310
Helix 9	AA9	A	210	216	Right-handed 310
Helix 10	AB1	A	232	236	Right-handed 310
Helix 11	AB2	A	254	260	Right-handed 310
Helix 12	AB3	A	276	282	Right-handed 310
Helix 13	AB4	A	298	304	Right-handed 310
Helix 14	AB5	A	320	326	Right-handed 310
Helix 15	AB6	A	342	348	Right-handed 310
Helix 16	AB7	A	365	370	Right-handed 310
Helix 17	AB8	A	387	392	Right-handed 310
Helix 18	AB9	A	419	424	Right-handed alpha
Helix 19	AC1	A	426	443	Right-handed alpha
Helix 20	AC2	A	464	470	Right-handed alpha
Helix 21	AC3	A	495	497	Right-handed 310
Helix 22	AC4	A	503	507	Right-handed 310
Helix 23	AC5	A	527	532	Right-handed alpha
Helix 24	AC6	A	548	559	Right-handed alpha
Helix 25	AC7	A	580	588	Right-handed alpha
Helix 26	AC8	A	589	592	Right-handed 310
Helix 27	AC9	A	608	618	Right-handed alpha
Helix 28	AD1	A	622	626	Right-handed 310
Helix 29	AD2	A	629	647	Right-handed alpha
Helix 30	AD3	A	650	660	Right-handed alpha
Helix 31	AD4	A	665	679	Right-handed alpha
Helix 32	AD5	A	697	710	Right-handed alpha
Helix 33	AD6	A	711	715	Right-handed 310
Helix 34	AD7	A	723	730	Right-handed alpha
Helix 35	AD8	A	749	763	Right-handed alpha
Helix 36	AD9	A	808	817	Right-handed alpha
Helix 37	AE1	A	861	881	Right-handed alpha
Helix 38	AE2	A	904	914	Right-handed alpha
Helix 39	AE3	A	928	934	Right-handed alpha
Helix 40	AE4	B	3	14	Right-handed alpha
Helix 41	AE5	B	55	62	Right-handed alpha
Helix 42	AE6	B	79	84	Right-handed 310
Helix 43	AE7	B	101	106	Right-handed 310
Helix 44	AE8	B	122	128	Right-handed 310
Helix 45	AE9	B	166	172	Right-handed 310
Helix 46	AF1	B	188	193	Right-handed 310
Helix 47	AF2	B	210	216	Right-handed 310
Helix 48	AF3	B	232	238	Right-handed 310
Helix 49	AF4	B	254	260	Right-handed 310
Helix 50	AF5	B	276	282	Right-handed 310
Helix 51	AF6	B	298	304	Right-handed 310
Helix 52	AF7	B	320	326	Right-handed 310
Helix 53	AF8	B	342	348	Right-handed 310
Helix 54	AF9	B	364	370	Right-handed 310
Helix 55	AG1	B	387	392	Right-handed 310
Helix 56	AG2	B	419	424	Right-handed alpha
Helix 57	AG3	B	426	443	Right-handed alpha
Helix 58	AG4	B	464	473	Right-handed alpha
Helix 59	AG5	B	495	497	Right-handed 310
Helix 60	AG6	B	503	507	Right-handed 310
Helix 61	AG7	B	526	532	Right-handed alpha
Helix 62	AG8	B	548	559	Right-handed alpha
Helix 63	AG9	B	580	588	Right-handed alpha
Helix 64	AH1	B	589	592	Right-handed 310
Helix 65	AH2	B	608	618	Right-handed alpha
Helix 66	AH3	B	622	626	Right-handed 310
Helix 67	AH4	B	629	647	Right-handed alpha
Helix 68	AH5	B	650	660	Right-handed alpha
Helix 69	AH6	B	665	679	Right-handed alpha
Helix 70	AH7	B	697	710	Right-handed alpha
Helix 71	AH8	B	711	715	Right-handed 310
Helix 72	AH9	B	723	728	Right-handed alpha
Helix 73	AI1	B	749	763	Right-handed alpha
Helix 74	AI2	B	810	817	Right-handed alpha
Helix 75	AI3	B	818	821	Right-handed 310
Helix 76	AI4	B	861	881	Right-handed alpha
Helix 77	AI5	B	904	911	Right-handed alpha
Helix 78	AI6	B	932	936	Right-handed 310

There are 16 sheets in PDB entry 6HLU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 15 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	19	20	first strand
Strand 2	A	30	33	parallel
Strand 3	A	39	43	anti-parallel
Strand 4	A	67	69	parallel
Strand 5	A	89	91	parallel
Strand 6	A	111	113	parallel
Strand 7	A	133	135	parallel
Strand 8	A	155	157	parallel
Strand 9	A	177	179	parallel
Strand 10	A	199	201	parallel
Strand 11	A	221	223	parallel
Strand 12	A	243	245	parallel
Strand 13	A	265	267	parallel
Strand 14	A	287	289	parallel
Strand 15	A	309	311	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	331	333	first strand
Strand 2	A	353	355	parallel
Strand 3	A	376	377	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	396	398	first strand
Strand 2	A	407	409	parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	490	493	first strand
Strand 2	A	510	514	anti-parallel
Strand 3	A	452	458	parallel
Strand 4	A	534	540	parallel
Strand 5	A	564	568	parallel
Strand 6	A	595	597	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	648	649	first strand
Strand 2	A	695	696	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	718	720	first strand
Strand 2	A	773	775	anti-parallel
Strand 3	A	767	768	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	821	827	first strand
Strand 2	A	830	834	anti-parallel
Strand 3	A	842	848	anti-parallel
Strand 4	A	853	859	anti-parallel
Strand 5	A	795	802	anti-parallel
Strand 6	A	888	893	anti-parallel
Strand 7	A	901	903	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	918	920	first strand
Strand 2	A	925	927	anti-parallel

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There are 15 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	19	20	first strand
Strand 2	B	30	33	parallel
Strand 3	B	39	43	anti-parallel
Strand 4	B	67	69	parallel
Strand 5	B	89	91	parallel
Strand 6	B	111	113	parallel
Strand 7	B	133	135	parallel
Strand 8	B	155	157	parallel
Strand 9	B	177	179	parallel
Strand 10	B	199	201	parallel
Strand 11	B	221	223	parallel
Strand 12	B	243	245	parallel
Strand 13	B	265	267	parallel
Strand 14	B	287	289	parallel
Strand 15	B	309	311	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	354	355	first strand
Strand 2	B	376	377	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	396	399	first strand
Strand 2	B	407	410	parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	490	493	first strand
Strand 2	B	510	514	anti-parallel
Strand 3	B	452	458	parallel
Strand 4	B	534	540	parallel
Strand 5	B	564	568	parallel
Strand 6	B	595	597	parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	648	649	first strand
Strand 2	B	695	696	anti-parallel
Strand 3	B	683	684	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	718	720	first strand
Strand 2	B	773	775	anti-parallel
Strand 3	B	767	768	anti-parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	830	834	first strand
Strand 2	B	841	848	anti-parallel
Strand 3	B	853	860	anti-parallel
Strand 4	B	799	802	anti-parallel
Strand 5	B	888	893	anti-parallel
Strand 6	B	901	903	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	919	920	first strand
Strand 2	B	925	926	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6HLU

Analysis of interatomic Contacts of Structural Units in PDB entry:
6HLU