Analysis of interatomic Contacts of Structural Units in PDB entry:
6HLW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6HLW entry

There are 4 chains in PDB entry 6HLW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 368ARG 528
B
 PRO 16LEU 55
C
 ILE 369ARG 528
D
 PRO 16ASN 56
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 6HLW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
380 391Right-handed alpha
Helix 2
AA2
B
17 28Right-handed alpha
Helix 3
AA3
B
30 40Right-handed alpha
Helix 4
AA4
C
379 388Right-handed alpha
Helix 5
AA5
D
17 28Right-handed alpha
Helix 6
AA6
D
30 40Right-handed alpha
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There are 6 sheets in PDB entry 6HLW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
373 377first strand
Strand 2
A
491 497anti-parallel
Strand 3
A
415 422anti-parallel
Strand 4
A
518 526anti-parallel
Strand 5
A
394 397anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
373 377first strand
Strand 2
A
491 497anti-parallel
Strand 3
A
415 422anti-parallel
Strand 4
A
518 526anti-parallel
Strand 5
B
44 45anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
476 485first strand
Strand 2
A
427 435anti-parallel
Strand 3
A
502 509anti-parallel
Strand 4
A
402 408anti-parallel
Strand 5
B
50 52anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
373 377first strand
Strand 2
C
491 497anti-parallel
Strand 3
C
415 422anti-parallel
Strand 4
C
518 526anti-parallel
Strand 5
C
394 397anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
373 377first strand
Strand 2
C
491 497anti-parallel
Strand 3
C
415 422anti-parallel
Strand 4
C
518 526anti-parallel
Strand 5
D
44 45anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
477 485first strand
Strand 2
C
427 435anti-parallel
Strand 3
C
502 509anti-parallel
Strand 4
C
402 408anti-parallel
Strand 5
D
50 54anti-parallel
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