Analysis of interatomic Contacts of Structural Units in PDB entry:
6HN4

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6HN4 entry

There are 2 chains in PDB entry 6HN4 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
E	PRO 595	ASP 888
F	PRO 4	ASP 888

There are 8 helices in PDB entry 6HN4. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	E	638	644	Right-handed 310
Helix 2	AA2	E	844	851	Right-handed alpha
Helix 3	AA3	F	17	24	Right-handed 310
Helix 4	AA4	F	42	48	Right-handed alpha
Helix 5	AA5	F	132	136	Right-handed 310
Helix 6	AA6	F	255	266	Right-handed alpha
Helix 7	AA7	F	638	644	Right-handed 310
Helix 8	AA8	F	844	851	Right-handed alpha

There are 16 sheets in PDB entry 6HN4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	599	604	first strand
Strand 2	E	611	616	anti-parallel
Strand 3	E	748	751	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	740	743	first strand
Strand 2	E	627	634	anti-parallel
Strand 3	E	759	767	anti-parallel
Strand 4	E	780	785	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	800	803	first strand
Strand 2	E	809	812	anti-parallel
Strand 3	E	853	855	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	841	843	first strand
Strand 2	E	823	832	anti-parallel
Strand 3	E	861	871	anti-parallel
Strand 4	E	875	876	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	841	843	first strand
Strand 2	E	823	832	anti-parallel
Strand 3	E	861	871	anti-parallel
Strand 4	E	882	886	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	6	14	first strand
Strand 2	F	26	38	parallel
Strand 3	F	56	57	parallel
Strand 4	F	81	82	parallel
Strand 5	F	111	112	parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	6	14	first strand
Strand 2	F	26	38	parallel
Strand 3	F	61	66	parallel
Strand 4	F	91	96	parallel
Strand 5	F	116	120	parallel
Strand 6	F	144	146	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	171	173	first strand
Strand 2	F	178	180	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	231	233	first strand
Strand 2	F	236	238	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	252	254	first strand
Strand 2	F	246	248	anti-parallel
Strand 3	F	283	285	parallel
Strand 4	F	278	280	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	292	295	first strand
Strand 2	F	300	303	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	599	604	first strand
Strand 2	F	611	616	anti-parallel
Strand 3	F	748	751	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	740	744	first strand
Strand 2	F	627	634	anti-parallel
Strand 3	F	759	767	anti-parallel
Strand 4	F	780	785	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	800	803	first strand
Strand 2	F	809	812	anti-parallel
Strand 3	F	853	855	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	841	843	first strand
Strand 2	F	823	832	anti-parallel
Strand 3	F	861	871	anti-parallel
Strand 4	F	875	876	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	841	843	first strand
Strand 2	F	823	832	anti-parallel
Strand 3	F	861	871	anti-parallel
Strand 4	F	882	886	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6HN4

Analysis of interatomic Contacts of Structural Units in PDB entry:
6HN4