Analysis of interatomic Contacts of Structural Units in PDB entry:
6HNK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6HNK entry

There is 1 chain in PDB entry 6HNK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 44LYS 338
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 6HNK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
55 72Right-handed alpha
Helix 2
AA2
A
90 104Right-handed alpha
Helix 3
AA3
A
113 124Right-handed alpha
Helix 4
AA4
A
136 141Right-handed alpha
Helix 5
AA5
A
161 167Right-handed alpha
Helix 6
AA6
A
168 173Right-handed alpha
Helix 7
AA7
A
187 205Right-handed alpha
Helix 8
AA8
A
215 217Right-handed 310
Helix 9
AA9
A
218 227Right-handed alpha
Helix 10
AB1
A
238 244Right-handed alpha
Helix 11
AB2
A
244 254Right-handed alpha
Helix 12
AB3
A
263 269Right-handed alpha
Helix 13
AB4
A
278 295Right-handed alpha
Helix 14
AB5
A
316 322Right-handed alpha
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There are 2 sheets in PDB entry 6HNK. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
80 86first strand
Strand 2
A
45 51parallel
Strand 3
A
108 112parallel
Strand 4
A
129 134parallel
Strand 5
A
155 157parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
207 213first strand
Strand 2
A
178 184parallel
Strand 3
A
232 235parallel
Strand 4
A
259 261parallel
Strand 5
A
273 277parallel
Strand 6
A
310 315anti-parallel
Strand 7
A
332 335parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il