Analysis of interatomic Contacts of Structural Units in PDB entry:
6HNU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6HNU entry

There are 2 chains in PDB entry 6HNU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 6LEU 491
B
 THR 5LEU 491
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 49 helices in PDB entry 6HNU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 16Right-handed 310
Helix 2
AA2
A
17 22Right-handed alpha
Helix 3
AA3
A
26 35Right-handed 310
Helix 4
AA4
A
49 53Right-handed 310
Helix 5
AA5
A
76 80Right-handed 310
Helix 6
AA6
A
88 92Right-handed 310
Helix 7
AA7
A
98 103Right-handed alpha
Helix 8
AA8
A
111 127Right-handed alpha
Helix 9
AA9
A
140 153Right-handed alpha
Helix 10
AB1
A
166 176Right-handed alpha
Helix 11
AB2
A
191 201Right-handed alpha
Helix 12
AB3
A
225 240Right-handed alpha
Helix 13
AB4
A
249 253Right-handed 310
Helix 14
AB5
A
260 262Right-handed 310
Helix 15
AB6
A
263 268Right-handed alpha
Helix 16
AB7
A
271 279Right-handed alpha
Helix 17
AB8
A
282 287Right-handed alpha
Helix 18
AB9
A
303 307Right-handed 310
Helix 19
AC1
A
315 328Right-handed alpha
Helix 20
AC2
A
333 378Right-handed alpha
Helix 21
AC3
A
401 403Right-handed 310
Helix 22
AC4
A
412 428Right-handed alpha
Helix 23
AC5
A
435 438Right-handed 310
Helix 24
AC6
A
470 490Right-handed alpha
Helix 25
AC7
B
12 16Right-handed 310
Helix 26
AC8
B
17 23Right-handed alpha
Helix 27
AC9
B
26 35Right-handed 310
Helix 28
AD1
B
49 53Right-handed 310
Helix 29
AD2
B
76 80Right-handed 310
Helix 30
AD3
B
88 92Right-handed 310
Helix 31
AD4
B
98 103Right-handed alpha
Helix 32
AD5
B
111 127Right-handed alpha
Helix 33
AD6
B
140 153Right-handed alpha
Helix 34
AD7
B
166 176Right-handed alpha
Helix 35
AD8
B
191 201Right-handed alpha
Helix 36
AD9
B
225 240Right-handed alpha
Helix 37
AE1
B
249 253Right-handed 310
Helix 38
AE2
B
260 262Right-handed 310
Helix 39
AE3
B
263 268Right-handed alpha
Helix 40
AE4
B
271 279Right-handed alpha
Helix 41
AE5
B
282 287Right-handed alpha
Helix 42
AE6
B
303 307Right-handed 310
Helix 43
AE7
B
315 328Right-handed alpha
Helix 44
AE8
B
333 378Right-handed alpha
Helix 45
AE9
B
379 381Right-handed 310
Helix 46
AF1
B
401 403Right-handed 310
Helix 47
AF2
B
412 427Right-handed alpha
Helix 48
AF3
B
435 438Right-handed 310
Helix 49
AF4
B
470 490Right-handed alpha
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There are 9 sheets in PDB entry 6HNU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
41 42first strand
Strand 2
B
429 430parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
81 86first strand
Strand 2
A
57 62anti-parallel
Strand 3
B
57 62anti-parallel
Strand 4
B
81 86anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
133 138first strand
Strand 2
A
309 314anti-parallel
Strand 3
A
292 297anti-parallel
Strand 4
A
242 246parallel
Strand 5
A
209 212parallel
Strand 6
A
158 162parallel
Strand 7
A
179 183parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
185 186first strand
Strand 2
A
189 190anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
383 384first strand
Strand 2
A
393 399anti-parallel
Strand 3
A
459 465anti-parallel
Strand 4
A
432 433anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
429 430first strand
Strand 2
B
41 42parallel
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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
133 138first strand
Strand 2
B
309 314anti-parallel
Strand 3
B
292 297anti-parallel
Strand 4
B
242 246parallel
Strand 5
B
209 212parallel
Strand 6
B
158 162parallel
Strand 7
B
179 183parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
185 186first strand
Strand 2
B
189 190anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
383 384first strand
Strand 2
B
393 399anti-parallel
Strand 3
B
459 465anti-parallel
Strand 4
B
432 433anti-parallel
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