Analysis of interatomic Contacts of Structural Units in PDB entry:
6HOX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6HOX entry

There is 1 chain in PDB entry 6HOX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 834GLU 1260
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 6HOX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
834 837Right-handed 310
Helix 2
AA2
A
915 922Right-handed 310
Helix 3
AA3
A
965 970Right-handed alpha
Helix 4
AA4
A
1046 1056Right-handed alpha
Helix 5
AA5
A
1057 1059Right-handed 310
Helix 6
AA6
A
1230 1235Right-handed alpha
Helix 7
AA7
A
1236 1239Right-handed 310
Helix 8
AA8
A
1240 1247Right-handed alpha
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There are 8 sheets in PDB entry 6HOX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
849 852first strand
Strand 2
A
839 846anti-parallel
Strand 3
A
1032 1041anti-parallel
Strand 4
A
875 880anti-parallel
Strand 5
A
867 870anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
849 852first strand
Strand 2
A
839 846anti-parallel
Strand 3
A
1032 1041anti-parallel
Strand 4
A
903 910anti-parallel
Strand 5
A
981 988anti-parallel
Strand 6
A
992 997anti-parallel
Strand 7
A
1000 1006anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
860 862first strand
Strand 2
A
887 889anti-parallel
Strand 3
A
1019 1024anti-parallel
Strand 4
A
926 932anti-parallel
Strand 5
A
936 942anti-parallel
Strand 6
A
945 951anti-parallel
Strand 7
A
957 961anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1078 1081first strand
Strand 2
A
1249 1252anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1089 1094first strand
Strand 2
A
1099 1105anti-parallel
Strand 3
A
1223 1229anti-parallel
Strand 4
A
1208 1212anti-parallel
Strand 5
A
1198 1202anti-parallel
Strand 6
A
1183 1187anti-parallel
Strand 7
A
1147 1148anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1109 1113first strand
Strand 2
A
1116 1119anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1131 1134first strand
Strand 2
A
1150 1153anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1160 1162first strand
Strand 2
A
1175 1177anti-parallel
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