Analysis of interatomic Contacts of Structural Units in PDB entry:
6HQ4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6HQ4 entry

There are 2 chains in PDB entry 6HQ4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 6LEU 402
B
 GLN 6LYS 401
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 6HQ4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
58 64Right-handed alpha
Helix 2
AA2
A
84 94Right-handed alpha
Helix 3
AA3
A
95 115Right-handed alpha
Helix 4
AA4
A
140 156Right-handed alpha
Helix 5
AA5
A
194 202Right-handed alpha
Helix 6
AA6
A
205 231Right-handed alpha
Helix 7
AA7
A
233 240Right-handed alpha
Helix 8
AA8
A
247 253Right-handed alpha
Helix 9
AA9
A
255 267Right-handed alpha
Helix 10
AB1
A
270 272Right-handed 310
Helix 11
AB2
A
279 285Right-handed 310
Helix 12
AB3
A
291 299Right-handed alpha
Helix 13
AB4
A
314 319Right-handed alpha
Helix 14
AB5
A
329 334Right-handed alpha
Helix 15
AB6
A
339 355Right-handed alpha
Helix 16
AB7
A
367 378Right-handed alpha
Helix 17
AB8
A
394 401Right-handed alpha
Helix 18
AB9
B
58 64Right-handed alpha
Helix 19
AC1
B
84 94Right-handed alpha
Helix 20
AC2
B
95 110Right-handed alpha
Helix 21
AC3
B
140 156Right-handed alpha
Helix 22
AC4
B
192 202Right-handed alpha
Helix 23
AC5
B
205 231Right-handed alpha
Helix 24
AC6
B
233 240Right-handed alpha
Helix 25
AC7
B
247 253Right-handed alpha
Helix 26
AC8
B
255 267Right-handed alpha
Helix 27
AC9
B
270 272Right-handed 310
Helix 28
AD1
B
279 285Right-handed 310
Helix 29
AD2
B
291 299Right-handed alpha
Helix 30
AD3
B
313 321Right-handed alpha
Helix 31
AD4
B
329 334Right-handed alpha
Helix 32
AD5
B
339 355Right-handed alpha
Helix 33
AD6
B
367 378Right-handed alpha
Helix 34
AD7
B
392 401Right-handed alpha
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There are 7 sheets in PDB entry 6HQ4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 10first strand
Strand 2
A
77 83anti-parallel
Strand 3
A
25 31anti-parallel
Strand 4
A
55 56anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 17first strand
Strand 2
A
70 73anti-parallel
Strand 3
A
34 40anti-parallel
Strand 4
A
43 50anti-parallel
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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
159 168first strand
Strand 2
A
174 183anti-parallel
Strand 3
A
241 245parallel
Strand 4
A
274 278parallel
Strand 5
A
302 308parallel
Strand 6
A
325 328parallel
Strand 7
A
359 363parallel
Strand 8
A
381 383parallel
Strand 9
A
159 168anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
312 313first strand
Strand 2
B
311 312anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
7 10first strand
Strand 2
B
77 83anti-parallel
Strand 3
B
25 31anti-parallel
Strand 4
B
55 56anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
15 17first strand
Strand 2
B
70 73anti-parallel
Strand 3
B
34 40anti-parallel
Strand 4
B
43 50anti-parallel
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There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
159 168first strand
Strand 2
B
174 183anti-parallel
Strand 3
B
241 245parallel
Strand 4
B
274 278parallel
Strand 5
B
302 308parallel
Strand 6
B
325 328parallel
Strand 7
B
359 363parallel
Strand 8
B
381 383parallel
Strand 9
B
159 168anti-parallel
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