Analysis of interatomic Contacts of Structural Units in PDB entry:
6HQ8

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6HQ8 entry

There are 2 chains in PDB entry 6HQ8 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 19	ARG 1156
B	SER 19	LYS 133

There are 85 helices in PDB entry 6HQ8. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	38	41	Right-handed 310
Helix 2	AA2	A	70	72	Right-handed 310
Helix 3	AA3	A	80	87	Right-handed alpha
Helix 4	AA4	A	190	203	Right-handed alpha
Helix 5	AA5	A	255	261	Right-handed alpha
Helix 6	AA6	A	303	317	Right-handed alpha
Helix 7	AA7	A	319	341	Right-handed alpha
Helix 8	AA8	A	350	369	Right-handed alpha
Helix 9	AA9	A	379	390	Right-handed alpha
Helix 10	AB1	A	390	397	Right-handed alpha
Helix 11	AB2	A	408	416	Right-handed alpha
Helix 12	AB3	A	420	430	Right-handed alpha
Helix 13	AB4	A	469	483	Right-handed alpha
Helix 14	AB5	A	486	497	Right-handed alpha
Helix 15	AB6	A	534	549	Right-handed alpha
Helix 16	AB7	A	553	557	Right-handed 310
Helix 17	AB8	A	573	580	Right-handed alpha
Helix 18	AB9	A	588	602	Right-handed alpha
Helix 19	AC1	A	603	608	Right-handed 310
Helix 20	AC2	A	620	634	Right-handed alpha
Helix 21	AC3	A	652	659	Right-handed 310
Helix 22	AC4	A	665	685	Right-handed alpha
Helix 23	AC5	A	694	711	Right-handed alpha
Helix 24	AC6	A	712	716	Right-handed 310
Helix 25	AC7	A	719	745	Right-handed alpha
Helix 26	AC8	A	755	775	Right-handed alpha
Helix 27	AC9	A	805	815	Right-handed alpha
Helix 28	AD1	A	819	833	Right-handed alpha
Helix 29	AD2	A	853	857	Right-handed 310
Helix 30	AD3	A	861	867	Right-handed alpha
Helix 31	AD4	A	868	877	Right-handed alpha
Helix 32	AD5	A	899	912	Right-handed alpha
Helix 33	AD6	A	913	936	Right-handed alpha
Helix 34	AD7	A	937	940	Right-handed 310
Helix 35	AD8	A	942	947	Right-handed 310
Helix 36	AD9	A	958	978	Right-handed alpha
Helix 37	AE1	A	981	1000	Right-handed alpha
Helix 38	AE2	A	1004	1009	Right-handed alpha
Helix 39	AE3	A	1032	1046	Right-handed alpha
Helix 40	AE4	A	1062	1066	Right-handed 310
Helix 41	AE5	A	1129	1138	Right-handed alpha
Helix 42	AE6	A	1153	1155	Right-handed 310
Helix 43	AE7	B	38	41	Right-handed 310
Helix 44	AE8	B	70	72	Right-handed 310
Helix 45	AE9	B	80	87	Right-handed alpha
Helix 46	AF1	B	190	197	Right-handed alpha
Helix 47	AF2	B	197	203	Right-handed alpha
Helix 48	AF3	B	255	261	Right-handed alpha
Helix 49	AF4	B	303	317	Right-handed alpha
Helix 50	AF5	B	319	341	Right-handed alpha
Helix 51	AF6	B	350	369	Right-handed alpha
Helix 52	AF7	B	379	390	Right-handed alpha
Helix 53	AF8	B	390	397	Right-handed alpha
Helix 54	AF9	B	408	419	Right-handed alpha
Helix 55	AG1	B	420	430	Right-handed alpha
Helix 56	AG2	B	469	483	Right-handed alpha
Helix 57	AG3	B	486	497	Right-handed alpha
Helix 58	AG4	B	534	549	Right-handed alpha
Helix 59	AG5	B	553	557	Right-handed 310
Helix 60	AG6	B	573	580	Right-handed alpha
Helix 61	AG7	B	588	602	Right-handed alpha
Helix 62	AG8	B	603	608	Right-handed 310
Helix 63	AG9	B	620	634	Right-handed alpha
Helix 64	AH1	B	652	659	Right-handed 310
Helix 65	AH2	B	665	685	Right-handed alpha
Helix 66	AH3	B	694	711	Right-handed alpha
Helix 67	AH4	B	712	716	Right-handed 310
Helix 68	AH5	B	719	745	Right-handed alpha
Helix 69	AH6	B	755	775	Right-handed alpha
Helix 70	AH7	B	805	815	Right-handed alpha
Helix 71	AH8	B	819	833	Right-handed alpha
Helix 72	AH9	B	853	857	Right-handed 310
Helix 73	AI1	B	861	867	Right-handed alpha
Helix 74	AI2	B	868	877	Right-handed alpha
Helix 75	AI3	B	899	912	Right-handed alpha
Helix 76	AI4	B	913	936	Right-handed alpha
Helix 77	AI5	B	937	940	Right-handed 310
Helix 78	AI6	B	942	947	Right-handed 310
Helix 79	AI7	B	958	978	Right-handed alpha
Helix 80	AI8	B	981	1000	Right-handed alpha
Helix 81	AI9	B	1004	1009	Right-handed alpha
Helix 82	AJ1	B	1032	1046	Right-handed alpha
Helix 83	AJ2	B	1062	1066	Right-handed 310
Helix 84	AJ3	B	1129	1138	Right-handed alpha
Helix 85	AJ4	B	1153	1155	Right-handed 310

There are 30 sheets in PDB entry 6HQ8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3,

There are 11 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	22	27	first strand
Strand 2	A	30	36	anti-parallel
Strand 3	A	121	128	anti-parallel
Strand 4	A	134	140	anti-parallel
Strand 5	A	145	154	anti-parallel
Strand 6	A	158	167	anti-parallel
Strand 7	A	290	302	anti-parallel
Strand 8	A	236	242	anti-parallel
Strand 9	A	216	220	anti-parallel
Strand 10	A	205	209	anti-parallel
Strand 11	A	270	272	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	45	48	first strand
Strand 2	A	54	59	anti-parallel
Strand 3	A	64	68	anti-parallel
Strand 4	A	74	76	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	104	108	first strand
Strand 2	A	92	101	anti-parallel
Strand 3	A	173	184	anti-parallel
Strand 4	A	276	286	anti-parallel
Strand 5	A	248	250	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	346	347	first strand
Strand 2	A	1091	1096	anti-parallel
Strand 3	A	1099	1106	anti-parallel
Strand 4	A	1143	1151	parallel
Strand 5	A	1110	1115	anti-parallel
Strand 6	A	1120	1123	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	370	371	first strand
Strand 2	A	433	434	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	376	378	first strand
Strand 2	A	405	407	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	466	468	first strand
Strand 2	A	507	509	anti-parallel
Strand 3	A	513	514	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	569	571	first strand
Strand 2	A	585	587	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	636	637	first strand
Strand 2	A	641	643	anti-parallel
Strand 3	A	662	664	anti-parallel
Strand 4	A	786	792	anti-parallel
Strand 5	A	796	801	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	689	693	first strand
Strand 2	A	750	754	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	836	837	first strand
Strand 2	A	842	843	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	883	885	first strand
Strand 2	A	891	893	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	956	957	first strand
Strand 2	A	1016	1019	anti-parallel
Strand 3	A	1026	1028	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1047	1050	first strand
Strand 2	A	1053	1056	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1071	1076	first strand
Strand 2	A	1082	1087	anti-parallel

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There are 11 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	22	27	first strand
Strand 2	B	30	36	anti-parallel
Strand 3	B	121	128	anti-parallel
Strand 4	B	134	140	anti-parallel
Strand 5	B	145	154	anti-parallel
Strand 6	B	158	167	anti-parallel
Strand 7	B	290	302	anti-parallel
Strand 8	B	236	242	anti-parallel
Strand 9	B	216	220	anti-parallel
Strand 10	B	205	209	anti-parallel
Strand 11	B	270	272	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	45	48	first strand
Strand 2	B	54	59	anti-parallel
Strand 3	B	64	68	anti-parallel
Strand 4	B	74	76	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	104	108	first strand
Strand 2	B	92	101	anti-parallel
Strand 3	B	173	184	anti-parallel
Strand 4	B	276	286	anti-parallel
Strand 5	B	248	252	anti-parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	346	347	first strand
Strand 2	B	1091	1096	anti-parallel
Strand 3	B	1099	1106	anti-parallel
Strand 4	B	1143	1151	parallel
Strand 5	B	1110	1115	anti-parallel
Strand 6	B	1120	1123	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	370	371	first strand
Strand 2	B	433	434	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	376	378	first strand
Strand 2	B	405	407	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	466	468	first strand
Strand 2	B	507	509	anti-parallel
Strand 3	B	513	514	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	569	571	first strand
Strand 2	B	585	587	anti-parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	636	637	first strand
Strand 2	B	641	643	anti-parallel
Strand 3	B	662	664	anti-parallel
Strand 4	B	786	792	anti-parallel
Strand 5	B	796	801	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	689	693	first strand
Strand 2	B	750	754	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	836	837	first strand
Strand 2	B	842	843	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	883	885	first strand
Strand 2	B	891	893	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	956	957	first strand
Strand 2	B	1016	1019	anti-parallel
Strand 3	B	1026	1028	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1047	1050	first strand
Strand 2	B	1053	1056	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1071	1076	first strand
Strand 2	B	1082	1087	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6HQ8

Analysis of interatomic Contacts of Structural Units in PDB entry:
6HQ8