Analysis of interatomic Contacts of Structural Units in PDB entry:
6HQB

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6HQB entry

There are 2 chains in PDB entry 6HQB (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	GLY 751
B	MET 1	THR 527

There are101 helices in PDB entry 6HQB. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	45	54	Right-handed alpha
Helix 2	AA2	A	57	62	Right-handed alpha
Helix 3	AA3	A	64	97	Right-handed alpha
Helix 4	AA4	A	99	106	Right-handed alpha
Helix 5	AA5	A	122	127	Right-handed 310
Helix 6	AA6	A	142	150	Right-handed alpha
Helix 7	AA7	A	154	182	Right-handed alpha
Helix 8	AA8	A	192	203	Right-handed alpha
Helix 9	AA9	A	204	219	Right-handed alpha
Helix 10	AB1	A	219	228	Right-handed alpha
Helix 11	AB2	A	232	236	Right-handed 310
Helix 12	AB3	A	240	245	Right-handed alpha
Helix 13	AB4	A	245	253	Right-handed alpha
Helix 14	AB5	A	254	258	Right-handed 310
Helix 15	AB6	A	260	265	Right-handed alpha
Helix 16	AB7	A	267	274	Right-handed 310
Helix 17	AB8	A	289	308	Right-handed alpha
Helix 18	AB9	A	320	328	Right-handed alpha
Helix 19	AC1	A	339	345	Right-handed alpha
Helix 20	AC2	A	347	373	Right-handed alpha
Helix 21	AC3	A	382	415	Right-handed alpha
Helix 22	AC4	A	424	432	Right-handed alpha
Helix 23	AC5	A	432	465	Right-handed alpha
Helix 24	AC6	A	466	470	Right-handed 310
Helix 25	AC7	A	480	492	Right-handed alpha
Helix 26	AC8	A	493	496	Right-handed 310
Helix 27	AC9	A	528	555	Right-handed alpha
Helix 28	AD1	A	564	569	Right-handed alpha
Helix 29	AD2	A	586	617	Right-handed alpha
Helix 30	AD3	A	634	639	Right-handed alpha
Helix 31	AD4	A	641	648	Right-handed alpha
Helix 32	AD5	A	649	654	Right-handed alpha
Helix 33	AD6	A	654	659	Right-handed alpha
Helix 34	AD7	A	665	688	Right-handed alpha
Helix 35	AD8	A	689	707	Right-handed alpha
Helix 36	AD9	A	719	749	Right-handed alpha
Helix 37	AE1	B	9	14	Right-handed alpha
Helix 38	AE2	B	18	27	Right-handed alpha
Helix 39	AE3	B	30	34	Right-handed 310
Helix 40	AE4	B	38	72	Right-handed alpha
Helix 41	AE5	B	73	80	Right-handed alpha
Helix 42	AE6	B	98	105	Right-handed alpha
Helix 43	AE7	B	119	128	Right-handed alpha
Helix 44	AE8	B	131	157	Right-handed alpha
Helix 45	AE9	B	164	169	Right-handed alpha
Helix 46	AF1	B	170	181	Right-handed alpha
Helix 47	AF2	B	183	197	Right-handed alpha
Helix 48	AF3	B	197	202	Right-handed alpha
Helix 49	AF4	B	222	227	Right-handed alpha
Helix 50	AF5	B	230	235	Right-handed alpha
Helix 51	AF6	B	269	288	Right-handed alpha
Helix 52	AF7	B	300	308	Right-handed alpha
Helix 53	AF8	B	319	325	Right-handed alpha
Helix 54	AF9	B	327	351	Right-handed alpha
Helix 55	AG1	B	362	395	Right-handed alpha
Helix 56	AG2	B	404	412	Right-handed alpha
Helix 57	AG3	B	412	444	Right-handed alpha
Helix 58	AG4	B	446	450	Right-handed 310
Helix 59	AG5	B	455	464	Right-handed alpha
Helix 60	AG6	B	474	478	Right-handed 310
Helix 61	AG7	B	490	500	Right-handed alpha
Helix 62	AG8	B	510	537	Right-handed alpha
Helix 63	AG9	B	546	551	Right-handed 310
Helix 64	AH1	B	568	600	Right-handed alpha
Helix 65	AH2	B	602	610	Right-handed alpha
Helix 66	AH3	B	612	620	Right-handed alpha
Helix 67	AH4	B	622	624	Right-handed 310
Helix 68	AH5	B	625	630	Right-handed alpha
Helix 69	AH6	B	640	663	Right-handed alpha
Helix 70	AH7	B	664	682	Right-handed alpha
Helix 71	AH8	B	698	730	Right-handed alpha
Helix 72	AH9	C	15	21	Right-handed alpha
Helix 73	AI1	C	44	48	Right-handed 310
Helix 74	AI2	C	52	57	Right-handed alpha
Helix 75	AI3	D	19	25	Right-handed alpha
Helix 76	AI4	D	61	76	Right-handed alpha
Helix 77	AI5	D	121	125	Right-handed 310
Helix 78	AI6	E	62	66	Right-handed 310
Helix 79	AI7	F	13	21	Right-handed alpha
Helix 80	AI8	F	31	40	Right-handed alpha
Helix 81	AI9	F	58	62	Right-handed 310
Helix 82	AJ1	F	65	91	Right-handed alpha
Helix 83	AJ2	F	97	102	Right-handed alpha
Helix 84	AJ3	F	104	113	Right-handed alpha
Helix 85	AJ4	F	117	128	Right-handed alpha
Helix 86	AJ5	F	134	138	Right-handed 310
Helix 87	AJ6	I	8	21	Right-handed alpha
Helix 88	AJ7	I	21	36	Right-handed alpha
Helix 89	AJ8	J	2	8	Right-handed alpha
Helix 90	AJ9	J	10	33	Right-handed alpha
Helix 91	AK1	K	20	25	Right-handed alpha
Helix 92	AK2	K	25	41	Right-handed alpha
Helix 93	AK3	K	62	85	Right-handed alpha
Helix 94	AK4	L	27	34	Right-handed alpha
Helix 95	AK5	L	35	37	Right-handed 310
Helix 96	AK6	L	51	56	Right-handed alpha
Helix 97	AK7	L	56	61	Right-handed alpha
Helix 98	AK8	L	79	104	Right-handed alpha
Helix 99	AK9	L	116	123	Right-handed alpha
Helix 100	AL1	L	129	141	Right-handed alpha
Helix 101	AL2	M	4	30	Right-handed alpha

There are 11 sheets in PDB entry 6HQB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	16	18	first strand
Strand 2	A	183	185	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	128	131	first strand
Strand 2	A	134	136	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	514	516	first strand
Strand 2	A	519	522	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	619	621	first strand
Strand 2	A	627	629	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	87	90	first strand
Strand 2	B	113	115	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	4	7	first strand
Strand 2	C	65	68	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	27	30	first strand
Strand 2	C	38	41	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	53	59	first strand
Strand 2	D	27	34	anti-parallel
Strand 3	D	84	88	anti-parallel
Strand 4	D	94	98	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	38	41	first strand
Strand 2	D	47	50	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	8	10	first strand
Strand 2	E	22	28	anti-parallel
Strand 3	E	37	40	anti-parallel
Strand 4	E	58	61	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	8	9	first strand
Strand 2	F	44	45	anti-parallel
Strand 3	F	51	52	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6HQB

Analysis of interatomic Contacts of Structural Units in PDB entry:
6HQB