Analysis of interatomic Contacts of Structural Units in PDB entry:
6HQI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6HQI entry

There is 1 chain in PDB entry 6HQI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 35ASP 505
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 6HQI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
58 79Right-handed alpha
Helix 2
AA2
A
85 94Right-handed alpha
Helix 3
AA3
A
115 135Right-handed alpha
Helix 4
AA4
A
149 153Right-handed 310
Helix 5
AA5
A
156 161Right-handed 310
Helix 6
AA6
A
193 210Right-handed alpha
Helix 7
AA7
A
215 221Right-handed alpha
Helix 8
AA8
A
234 239Right-handed alpha
Helix 9
AA9
A
240 249Right-handed alpha
Helix 10
AB1
A
272 276Right-handed 310
Helix 11
AB2
A
277 295Right-handed alpha
Helix 12
AB3
A
305 310Right-handed alpha
Helix 13
AB4
A
328 331Right-handed 310
Helix 14
AB5
A
332 336Right-handed 310
Helix 15
AB6
A
345 350Right-handed 310
Helix 16
AB7
A
362 366Right-handed 310
Helix 17
AB8
A
368 373Right-handed alpha
Helix 18
AB9
A
394 401Right-handed alpha
Helix 19
AC1
A
468 476Right-handed alpha
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There are 4 sheets in PDB entry 6HQI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 51first strand
Strand 2
A
338 340parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
230 231first strand
Strand 2
A
460 467parallel
Strand 3
A
402 412anti-parallel
Strand 4
A
495 504anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
312 316first strand
Strand 2
A
322 326anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
382 387first strand
Strand 2
A
482 491anti-parallel
Strand 3
A
418 424anti-parallel
Strand 4
A
440 446anti-parallel
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