Analysis of interatomic Contacts of Structural Units in PDB entry:
6HQV

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6HQV entry

There is 1 chain in PDB entry 6HQV (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 15	GLY 1344

There are147 helices in PDB entry 6HQV. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	36	46	Right-handed alpha
Helix 2	AA2	A	59	75	Right-handed alpha
Helix 3	AA3	A	89	93	Right-handed 310
Helix 4	AA4	A	94	108	Right-handed alpha
Helix 5	AA5	A	121	135	Right-handed alpha
Helix 6	AA6	A	136	138	Right-handed 310
Helix 7	AA7	A	147	153	Right-handed alpha
Helix 8	AA8	A	185	189	Right-handed 310
Helix 9	AA9	A	191	210	Right-handed alpha
Helix 10	AB1	A	210	229	Right-handed alpha
Helix 11	AB2	A	234	240	Right-handed alpha
Helix 12	AB3	A	242	264	Right-handed alpha
Helix 13	AB4	A	269	276	Right-handed 310
Helix 14	AB5	A	277	289	Right-handed alpha
Helix 15	AB6	A	293	312	Right-handed alpha
Helix 16	AB7	A	316	330	Right-handed alpha
Helix 17	AB8	A	338	346	Right-handed alpha
Helix 18	AB9	A	351	360	Right-handed alpha
Helix 19	AC1	A	390	399	Right-handed alpha
Helix 20	AC2	A	421	434	Right-handed alpha
Helix 21	AC3	A	447	460	Right-handed alpha
Helix 22	AC4	A	495	506	Right-handed alpha
Helix 23	AC5	A	524	528	Right-handed 310
Helix 24	AC6	A	530	540	Right-handed alpha
Helix 25	AC7	A	575	586	Right-handed alpha
Helix 26	AC8	A	604	618	Right-handed alpha
Helix 27	AC9	A	650	665	Right-handed alpha
Helix 28	AD1	A	679	682	Right-handed 310
Helix 29	AD2	A	683	688	Right-handed alpha
Helix 30	AD3	A	724	726	Right-handed 310
Helix 31	AD4	A	727	736	Right-handed alpha
Helix 32	AD5	A	747	751	Right-handed 310
Helix 33	AD6	A	756	766	Right-handed alpha
Helix 34	AD7	A	767	769	Right-handed 310
Helix 35	AD8	A	785	789	Right-handed 310
Helix 36	AD9	A	801	812	Right-handed alpha
Helix 37	AE1	A	824	830	Right-handed 310
Helix 38	AE2	A	831	832	Right-handed 310
Helix 39	AE3	A	833	841	Right-handed alpha
Helix 40	AE4	A	880	893	Right-handed alpha
Helix 41	AE5	A	899	908	Right-handed alpha
Helix 42	AE6	A	910	917	Right-handed alpha
Helix 43	AE7	A	919	939	Right-handed alpha
Helix 44	AE8	A	950	953	Right-handed 310
Helix 45	AE9	A	954	967	Right-handed alpha
Helix 46	AF1	A	979	987	Right-handed alpha
Helix 47	AF2	A	997	1012	Right-handed alpha
Helix 48	AF3	A	1032	1043	Right-handed alpha
Helix 49	AF4	A	1047	1054	Right-handed alpha
Helix 50	AF5	A	1068	1072	Right-handed 310
Helix 51	AF6	A	1074	1079	Right-handed alpha
Helix 52	AF7	A	1090	1092	Right-handed 310
Helix 53	AF8	A	1096	1112	Right-handed alpha
Helix 54	AF9	A	1121	1125	Right-handed 310
Helix 55	AG1	A	1132	1146	Right-handed alpha
Helix 56	AG2	A	1158	1168	Right-handed alpha
Helix 57	AG3	A	1192	1203	Right-handed alpha
Helix 58	AG4	A	1215	1232	Right-handed alpha
Helix 59	AG5	A	1246	1254	Right-handed alpha
Helix 60	AG6	A	1274	1285	Right-handed alpha
Helix 61	AG7	A	1304	1317	Right-handed alpha
Helix 62	AG8	A	1331	1339	Right-handed alpha
Helix 63	AG9	A	1356	1360	Right-handed 310
Helix 64	AH1	A	1364	1371	Right-handed alpha
Helix 65	AH2	A	1393	1404	Right-handed alpha
Helix 66	AH3	A	1410	1415	Right-handed alpha
Helix 67	AH4	A	1428	1441	Right-handed alpha
Helix 68	AH5	A	1452	1461	Right-handed alpha
Helix 69	AH6	A	1473	1478	Right-handed 310
Helix 70	AH7	A	1496	1509	Right-handed alpha
Helix 71	AH8	A	1511	1516	Right-handed alpha
Helix 72	AH9	A	1529	1538	Right-handed alpha
Helix 73	AI1	A	1544	1562	Right-handed alpha
Helix 74	AI2	A	1566	1576	Right-handed alpha
Helix 75	AI3	B	36	46	Right-handed alpha
Helix 76	AI4	B	59	75	Right-handed alpha
Helix 77	AI5	B	89	93	Right-handed 310
Helix 78	AI6	B	94	108	Right-handed alpha
Helix 79	AI7	B	121	135	Right-handed alpha
Helix 80	AI8	B	136	138	Right-handed 310
Helix 81	AI9	B	147	153	Right-handed alpha
Helix 82	AJ1	B	185	189	Right-handed 310
Helix 83	AJ2	B	191	210	Right-handed alpha
Helix 84	AJ3	B	210	229	Right-handed alpha
Helix 85	AJ4	B	234	240	Right-handed alpha
Helix 86	AJ5	B	242	264	Right-handed alpha
Helix 87	AJ6	B	269	276	Right-handed 310
Helix 88	AJ7	B	277	289	Right-handed alpha
Helix 89	AJ8	B	293	312	Right-handed alpha
Helix 90	AJ9	B	316	330	Right-handed alpha
Helix 91	AK1	B	338	346	Right-handed alpha
Helix 92	AK2	B	351	360	Right-handed alpha
Helix 93	AK3	B	390	399	Right-handed alpha
Helix 94	AK4	B	421	434	Right-handed alpha
Helix 95	AK5	B	447	460	Right-handed alpha
Helix 96	AK6	B	495	506	Right-handed alpha
Helix 97	AK7	B	524	528	Right-handed 310
Helix 98	AK8	B	530	540	Right-handed alpha
Helix 99	AK9	B	575	586	Right-handed alpha
Helix 100	AL1	B	604	618	Right-handed alpha
Helix 101	AL2	B	650	665	Right-handed alpha
Helix 102	AL3	B	679	682	Right-handed 310
Helix 103	AL4	B	683	688	Right-handed alpha
Helix 104	AL5	B	724	726	Right-handed 310
Helix 105	AL6	B	727	736	Right-handed alpha
Helix 106	AL7	B	747	751	Right-handed 310
Helix 107	AL8	B	756	766	Right-handed alpha
Helix 108	AL9	B	767	769	Right-handed 310
Helix 109	AM1	B	785	789	Right-handed 310
Helix 110	AM2	B	801	812	Right-handed alpha
Helix 111	AM3	B	824	830	Right-handed 310
Helix 112	AM4	B	831	832	Right-handed 310
Helix 113	AM5	B	833	841	Right-handed alpha
Helix 114	AM6	B	878	893	Right-handed alpha
Helix 115	AM7	B	899	908	Right-handed alpha
Helix 116	AM8	B	910	917	Right-handed alpha
Helix 117	AM9	B	919	939	Right-handed alpha
Helix 118	AN1	B	950	953	Right-handed 310
Helix 119	AN2	B	954	967	Right-handed alpha
Helix 120	AN3	B	998	1012	Right-handed alpha
Helix 121	AN4	B	1032	1043	Right-handed alpha
Helix 122	AN5	B	1047	1054	Right-handed alpha
Helix 123	AN6	B	1068	1072	Right-handed 310
Helix 124	AN7	B	1074	1079	Right-handed alpha
Helix 125	AN8	B	1090	1092	Right-handed 310
Helix 126	AN9	B	1096	1112	Right-handed alpha
Helix 127	AO1	B	1121	1125	Right-handed 310
Helix 128	AO2	B	1132	1146	Right-handed alpha
Helix 129	AO3	B	1158	1168	Right-handed alpha
Helix 130	AO4	B	1192	1203	Right-handed alpha
Helix 131	AO5	B	1215	1232	Right-handed alpha
Helix 132	AO6	B	1246	1254	Right-handed alpha
Helix 133	AO7	B	1274	1285	Right-handed alpha
Helix 134	AO8	B	1304	1317	Right-handed alpha
Helix 135	AO9	B	1331	1339	Right-handed alpha
Helix 136	AP1	B	1356	1360	Right-handed 310
Helix 137	AP2	B	1364	1371	Right-handed alpha
Helix 138	AP3	B	1393	1404	Right-handed alpha
Helix 139	AP4	B	1410	1415	Right-handed alpha
Helix 140	AP5	B	1428	1441	Right-handed alpha
Helix 141	AP6	B	1452	1461	Right-handed alpha
Helix 142	AP7	B	1473	1478	Right-handed 310
Helix 143	AP8	B	1496	1509	Right-handed alpha
Helix 144	AP9	B	1511	1516	Right-handed alpha
Helix 145	AQ1	B	1529	1538	Right-handed alpha
Helix 146	AQ2	B	1544	1562	Right-handed alpha
Helix 147	AQ3	B	1566	1576	Right-handed alpha

There are 30 sheets in PDB entry 6HQV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	17	21	first strand
Strand 2	A	24	30	anti-parallel
Strand 3	A	179	183	parallel
Strand 4	A	140	145	parallel
Strand 5	A	115	120	parallel
Strand 6	A	50	56	parallel
Strand 7	A	80	86	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	159	164	first strand
Strand 2	A	167	174	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	371	372	first strand
Strand 2	A	387	388	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	375	377	first strand
Strand 2	A	380	381	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	819	821	first strand
Strand 2	A	401	404	anti-parallel
Strand 3	A	846	849	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	413	415	first strand
Strand 2	A	667	670	parallel
Strand 3	A	703	706	anti-parallel
Strand 4	A	695	698	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	463	468	first strand
Strand 2	A	473	479	anti-parallel
Strand 3	A	436	442	anti-parallel
Strand 4	A	644	646	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	490	491	first strand
Strand 2	A	516	520	parallel
Strand 3	A	555	558	anti-parallel
Strand 4	A	544	546	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	566	571	first strand
Strand 2	A	593	598	parallel
Strand 3	A	631	634	anti-parallel
Strand 4	A	623	624	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	713	714	first strand
Strand 2	A	738	739	parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	719	720	first strand
Strand 2	A	741	745	parallel
Strand 3	A	778	782	anti-parallel
Strand 4	A	772	775	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	896	898	first strand
Strand 2	A	944	946	parallel
Strand 3	A	871	875	parallel
Strand 4	A	971	974	parallel
Strand 5	A	1015	1016	parallel

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There are 8 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1237	1242	first strand
Strand 2	A	1205	1211	parallel
Strand 3	A	1173	1179	parallel
Strand 4	A	1150	1154	parallel
Strand 5	A	1115	1118	parallel
Strand 6	A	1085	1088	parallel
Strand 7	A	1059	1063	parallel
Strand 8	A	1257	1259	parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1321	1326	first strand
Strand 2	A	1292	1297	parallel
Strand 3	A	1343	1348	parallel
Strand 4	A	1375	1379	anti-parallel
Strand 5	A	1387	1391	anti-parallel
Strand 6	A	1362	1363	parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1468	1470	first strand
Strand 2	A	1446	1449	parallel
Strand 3	A	1422	1425	parallel
Strand 4	A	1484	1487	parallel
Strand 5	A	1518	1521	parallel
Strand 6	A	1541	1543	parallel

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There are 7 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	17	21	first strand
Strand 2	B	24	30	anti-parallel
Strand 3	B	179	183	parallel
Strand 4	B	140	145	parallel
Strand 5	B	115	120	parallel
Strand 6	B	50	56	parallel
Strand 7	B	80	86	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	159	164	first strand
Strand 2	B	167	174	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	370	372	first strand
Strand 2	B	387	389	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	375	377	first strand
Strand 2	B	380	381	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	819	821	first strand
Strand 2	B	401	404	anti-parallel
Strand 3	B	846	849	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	413	415	first strand
Strand 2	B	667	670	parallel
Strand 3	B	703	706	anti-parallel
Strand 4	B	695	698	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	463	468	first strand
Strand 2	B	473	479	anti-parallel
Strand 3	B	436	442	anti-parallel
Strand 4	B	644	646	parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	490	491	first strand
Strand 2	B	516	520	parallel
Strand 3	B	555	558	anti-parallel
Strand 4	B	544	546	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	566	571	first strand
Strand 2	B	593	598	parallel
Strand 3	B	631	634	anti-parallel
Strand 4	B	623	624	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	713	714	first strand
Strand 2	B	738	739	parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	719	720	first strand
Strand 2	B	741	745	parallel
Strand 3	B	778	782	anti-parallel
Strand 4	B	772	775	anti-parallel

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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	896	898	first strand
Strand 2	B	944	946	parallel
Strand 3	B	871	875	parallel
Strand 4	B	971	974	parallel
Strand 5	B	1015	1016	parallel

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There are 8 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1237	1242	first strand
Strand 2	B	1205	1211	parallel
Strand 3	B	1173	1179	parallel
Strand 4	B	1150	1154	parallel
Strand 5	B	1115	1118	parallel
Strand 6	B	1085	1088	parallel
Strand 7	B	1059	1063	parallel
Strand 8	B	1257	1259	parallel

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There are 6 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1321	1326	first strand
Strand 2	B	1292	1297	parallel
Strand 3	B	1343	1348	parallel
Strand 4	B	1375	1379	anti-parallel
Strand 5	B	1387	1391	anti-parallel
Strand 6	B	1362	1363	parallel

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There are 6 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1468	1470	first strand
Strand 2	B	1446	1449	parallel
Strand 3	B	1422	1425	parallel
Strand 4	B	1484	1487	parallel
Strand 5	B	1518	1521	parallel
Strand 6	B	1541	1543	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6HQV

Analysis of interatomic Contacts of Structural Units in PDB entry:
6HQV