Analysis of interatomic Contacts of Structural Units in PDB entry:
6HQW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6HQW entry

There are 2 chains in PDB entry 6HQW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 39GLU 443
B
 SER 39GLU 443
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 6HQW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
39 43Right-handed 310
Helix 2
AA2
A
47 52Right-handed alpha
Helix 3
AA3
A
55 66Right-handed alpha
Helix 4
AA4
A
84 93Right-handed alpha
Helix 5
AA5
A
128 132Right-handed 310
Helix 6
AA6
A
135 142Right-handed alpha
Helix 7
AA7
A
143 148Right-handed 310
Helix 8
AA8
A
149 170Right-handed alpha
Helix 9
AA9
A
179 183Right-handed alpha
Helix 10
AB1
A
183 197Right-handed alpha
Helix 11
AB2
A
207 212Right-handed alpha
Helix 12
AB3
A
221 223Right-handed 310
Helix 13
AB4
A
224 248Right-handed alpha
Helix 14
AB5
A
254 261Right-handed alpha
Helix 15
AB6
A
269 284Right-handed alpha
Helix 16
AB7
A
285 302Right-handed alpha
Helix 17
AB8
A
302 312Right-handed alpha
Helix 18
AB9
A
315 328Right-handed alpha
Helix 19
AC1
A
357 362Right-handed alpha
Helix 20
AC2
A
380 384Right-handed 310
Helix 21
AC3
A
396 414Right-handed alpha
Helix 22
AC4
B
39 43Right-handed 310
Helix 23
AC5
B
47 52Right-handed alpha
Helix 24
AC6
B
55 66Right-handed alpha
Helix 25
AC7
B
84 93Right-handed alpha
Helix 26
AC8
B
128 132Right-handed 310
Helix 27
AC9
B
135 145Right-handed alpha
Helix 28
AD1
B
146 148Right-handed 310
Helix 29
AD2
B
149 171Right-handed alpha
Helix 30
AD3
B
179 183Right-handed alpha
Helix 31
AD4
B
185 191Right-handed alpha
Helix 32
AD5
B
276 302Right-handed alpha
Helix 33
AD6
B
302 312Right-handed alpha
Helix 34
AD7
B
315 328Right-handed alpha
Helix 35
AD8
B
358 362Right-handed alpha
Helix 36
AD9
B
380 384Right-handed 310
Helix 37
AE1
B
389 393Right-handed 310
Helix 38
AE2
B
396 413Right-handed alpha
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There are 5 sheets in PDB entry 6HQW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
68 71first strand
Strand 2
A
79 82anti-parallel
Strand 3
A
353 356parallel
Strand 4
A
333 337anti-parallel
Strand 5
A
98 99anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
177 178first strand
Strand 2
A
435 441anti-parallel
Strand 3
A
419 426anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
341 342first strand
Strand 2
A
347 348anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
68 71first strand
Strand 2
B
79 82anti-parallel
Strand 3
B
353 357parallel
Strand 4
B
332 336anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
177 178first strand
Strand 2
B
435 441anti-parallel
Strand 3
B
419 426anti-parallel
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