Analysis of interatomic Contacts of Structural Units in PDB entry:
6HR1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6HR1 entry

There are 4 chains in PDB entry 6HR1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -35PHE 64
A
 LEU 68ALA 399
B
 GLY -35PHE 64
B
 LEU 68ALA 399
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 6HR1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
-34 7Right-handed alpha
Helix 2
AA2
A
56 61Right-handed 310
Helix 3
AA3
A
68 72Right-handed 310
Helix 4
AA4
A
75 81Right-handed 310
Helix 5
AA5
A
82 87Right-handed alpha
Helix 6
AA6
A
257 272Right-handed alpha
Helix 7
AA7
A
280 291Right-handed alpha
Helix 8
AA8
A
296 308Right-handed alpha
Helix 9
AA9
A
317 326Right-handed alpha
Helix 10
AB1
A
332 345Right-handed alpha
Helix 11
AB2
A
353 365Right-handed alpha
Helix 12
AB3
A
369 381Right-handed alpha
Helix 13
AB4
A
390 398Right-handed alpha
Helix 14
AB5
B
-34 2Right-handed alpha
Helix 15
AB6
B
3 9Right-handed 310
Helix 16
AB7
B
56 61Right-handed 310
Helix 17
AB8
B
68 72Right-handed 310
Helix 18
AB9
B
75 81Right-handed 310
Helix 19
AC1
B
82 87Right-handed alpha
Helix 20
AC2
B
156 159Right-handed 310
Helix 21
AC3
B
257 272Right-handed alpha
Helix 22
AC4
B
280 291Right-handed alpha
Helix 23
AC5
B
296 308Right-handed alpha
Helix 24
AC6
B
317 324Right-handed alpha
Helix 25
AC7
B
333 345Right-handed alpha
Helix 26
AC8
B
353 365Right-handed alpha
Helix 27
AC9
B
369 381Right-handed alpha
Helix 28
AD1
B
390 398Right-handed alpha
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There are 6 sheets in PDB entry 6HR1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 12 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 22first strand
Strand 2
A
25 36anti-parallel
Strand 3
A
41 48anti-parallel
Strand 4
A
217 227anti-parallel
Strand 5
A
199 208anti-parallel
Strand 6
A
148 155anti-parallel
Strand 7
A
160 170anti-parallel
Strand 8
A
176 187anti-parallel
Strand 9
A
92 100anti-parallel
Strand 10
A
105 115anti-parallel
Strand 11
A
118 128anti-parallel
Strand 12
A
11 22parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
278 279first strand
Strand 2
A
315 316anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
351 352first strand
Strand 2
A
388 389anti-parallel
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There are 12 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
11 22first strand
Strand 2
B
25 36anti-parallel
Strand 3
B
41 48anti-parallel
Strand 4
B
217 227anti-parallel
Strand 5
B
199 208anti-parallel
Strand 6
B
148 155anti-parallel
Strand 7
B
160 170anti-parallel
Strand 8
B
176 187anti-parallel
Strand 9
B
92 100anti-parallel
Strand 10
B
105 115anti-parallel
Strand 11
B
118 128anti-parallel
Strand 12
B
11 22parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
278 279first strand
Strand 2
B
315 316anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
351 352first strand
Strand 2
B
388 389anti-parallel
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