Analysis of interatomic Contacts of Structural Units in PDB entry:
6HR5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6HR5 entry

There is 1 chain in PDB entry 6HR5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 8ASP 443
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 6HR5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
25 29Right-handed 310
Helix 2
AA2
A
35 45Right-handed alpha
Helix 3
AA3
A
59 68Right-handed alpha
Helix 4
AA4
A
70 75Right-handed alpha
Helix 5
AA5
A
91 98Right-handed alpha
Helix 6
AA6
A
149 164Right-handed alpha
Helix 7
AA7
A
245 271Right-handed alpha
Helix 8
AA8
A
273 275Right-handed 310
Helix 9
AA9
A
290 294Right-handed 310
Helix 10
AB1
A
301 306Right-handed alpha
Helix 11
AB2
A
329 339Right-handed alpha
Helix 12
AB3
A
352 357Right-handed alpha
Helix 13
AB4
A
420 422Right-handed 310
Helix 14
AB5
A
423 439Right-handed alpha
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There are 3 sheets in PDB entry 6HR5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 48first strand
Strand 2
A
309 312anti-parallel
Strand 3
A
277 283anti-parallel
Strand 4
A
11 17parallel
Strand 5
A
172 177parallel
Strand 6
A
102 107parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
122 123first strand
Strand 2
A
137 138anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
368 373first strand
Strand 2
A
382 387anti-parallel
Strand 3
A
390 395anti-parallel
Strand 4
A
402 406anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il