Analysis of interatomic Contacts of Structural Units in PDB entry:
6HRC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6HRC entry

There are 3 chains in PDB entry 6HRC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LYS 564
B
 MET 1LYS 564
C
 MET 1LYS 105
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 90 helices in PDB entry 6HRC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 9Right-handed alpha
Helix 2
AA2
A
12 44Right-handed alpha
Helix 3
AA3
A
47 52Right-handed 310
Helix 4
AA4
A
54 59Right-handed alpha
Helix 5
AA5
A
60 64Right-handed 310
Helix 6
AA6
A
70 102Right-handed alpha
Helix 7
AA7
A
103 118Right-handed alpha
Helix 8
AA8
A
120 126Right-handed alpha
Helix 9
AA9
A
128 170Right-handed alpha
Helix 10
AB1
A
171 192Right-handed alpha
Helix 11
AB2
A
193 220Right-handed alpha
Helix 12
AB3
A
221 228Right-handed alpha
Helix 13
AB4
A
230 279Right-handed alpha
Helix 14
AB5
A
286 333Right-handed alpha
Helix 15
AB6
A
387 396Right-handed alpha
Helix 16
AB7
A
417 423Right-handed alpha
Helix 17
AB8
A
439 444Right-handed alpha
Helix 18
AB9
A
450 461Right-handed alpha
Helix 19
AC1
A
463 469Right-handed alpha
Helix 20
AC2
A
472 476Right-handed 310
Helix 21
AC3
A
479 483Right-handed 310
Helix 22
AC4
A
486 501Right-handed alpha
Helix 23
AC5
A
516 529Right-handed alpha
Helix 24
AC6
A
544 548Right-handed 310
Helix 25
AC7
B
2 9Right-handed alpha
Helix 26
AC8
B
12 43Right-handed alpha
Helix 27
AC9
B
48 53Right-handed 310
Helix 28
AD1
B
60 64Right-handed 310
Helix 29
AD2
B
71 102Right-handed alpha
Helix 30
AD3
B
103 118Right-handed alpha
Helix 31
AD4
B
120 126Right-handed alpha
Helix 32
AD5
B
128 135Right-handed alpha
Helix 33
AD6
B
137 170Right-handed alpha
Helix 34
AD7
B
172 221Right-handed alpha
Helix 35
AD8
B
221 228Right-handed alpha
Helix 36
AD9
B
232 257Right-handed alpha
Helix 37
AE1
B
257 281Right-handed alpha
Helix 38
AE2
B
290 333Right-handed alpha
Helix 39
AE3
B
387 396Right-handed alpha
Helix 40
AE4
B
417 423Right-handed alpha
Helix 41
AE5
B
439 444Right-handed alpha
Helix 42
AE6
B
450 461Right-handed alpha
Helix 43
AE7
B
463 469Right-handed alpha
Helix 44
AE8
B
472 476Right-handed 310
Helix 45
AE9
B
479 483Right-handed 310
Helix 46
AF1
B
486 501Right-handed alpha
Helix 47
AF2
B
516 529Right-handed alpha
Helix 48
AF3
C
2 9Right-handed alpha
Helix 49
AF4
C
12 43Right-handed alpha
Helix 50
AF5
C
48 52Right-handed 310
Helix 51
AF6
C
54 59Right-handed alpha
Helix 52
AF7
C
60 64Right-handed 310
Helix 53
AF8
C
69 118Right-handed alpha
Helix 54
AF9
C
120 126Right-handed alpha
Helix 55
AG1
C
128 137Right-handed alpha
Helix 56
AG2
C
137 170Right-handed alpha
Helix 57
AG3
C
172 221Right-handed alpha
Helix 58
AG4
C
221 228Right-handed alpha
Helix 59
AG5
C
231 281Right-handed alpha
Helix 60
AG6
C
286 333Right-handed alpha
Helix 61
AG7
C
387 396Right-handed alpha
Helix 62
AG8
C
417 423Right-handed alpha
Helix 63
AG9
C
439 444Right-handed alpha
Helix 64
AH1
C
450 461Right-handed alpha
Helix 65
AH2
C
463 469Right-handed alpha
Helix 66
AH3
C
472 476Right-handed 310
Helix 67
AH4
C
479 483Right-handed 310
Helix 68
AH5
C
486 501Right-handed alpha
Helix 69
AH6
C
516 529Right-handed alpha
Helix 70
AH7
D
2 9Right-handed alpha
Helix 71
AH8
D
12 43Right-handed alpha
Helix 72
AH9
D
48 53Right-handed 310
Helix 73
AI1
D
54 59Right-handed alpha
Helix 74
AI2
D
60 64Right-handed 310
Helix 75
AI3
D
69 119Right-handed alpha
Helix 76
AI4
D
120 127Right-handed alpha
Helix 77
AI5
D
128 170Right-handed alpha
Helix 78
AI6
D
171 221Right-handed alpha
Helix 79
AI7
D
221 228Right-handed alpha
Helix 80
AI8
D
230 281Right-handed alpha
Helix 81
AI9
D
288 333Right-handed alpha
Helix 82
AJ1
D
387 396Right-handed alpha
Helix 83
AJ2
D
417 423Right-handed alpha
Helix 84
AJ3
D
439 444Right-handed alpha
Helix 85
AJ4
D
450 461Right-handed alpha
Helix 86
AJ5
D
463 469Right-handed alpha
Helix 87
AJ6
D
472 476Right-handed 310
Helix 88
AJ7
D
479 483Right-handed 310
Helix 89
AJ8
D
486 502Right-handed alpha
Helix 90
AJ9
D
518 529Right-handed alpha
Back to top of page

There are 8 sheets in PDB entry 6HRC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
371 373first strand
Strand 2
A
348 350anti-parallel
Strand 3
A
407 408anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
506 507first strand
Strand 2
A
536 538parallel
Strand 3
A
378 381parallel
Strand 4
A
552 554parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
371 373first strand
Strand 2
B
348 350anti-parallel
Strand 3
B
407 408anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
506 507first strand
Strand 2
B
536 539parallel
Strand 3
B
378 381parallel
Strand 4
B
552 555parallel
Strand 5
B
560 563anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
371 373first strand
Strand 2
C
348 350anti-parallel
Strand 3
C
407 408anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
506 507first strand
Strand 2
C
536 539parallel
Strand 3
C
378 382parallel
Strand 4
C
551 555parallel
Strand 5
C
561 563anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
371 373first strand
Strand 2
D
348 350anti-parallel
Strand 3
D
407 408anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
506 507first strand
Strand 2
D
536 539parallel
Strand 3
D
378 381parallel
Strand 4
D
552 554parallel
Strand 5
D
561 563anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il