Analysis of interatomic Contacts of Structural Units in PDB entry:
6HRL

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6HRL entry

There are 2 chains in PDB entry 6HRL (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 337	LEU 623
B	GLY 337	LEU 623

There are no helices in PDB entry 6HRL

There are 14 sheets in PDB entry 6HRL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	366	370	first strand
Strand 2	A	357	361	anti-parallel
Strand 3	A	339	345	anti-parallel
Strand 4	A	616	622	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	348	349	first strand
Strand 2	A	352	353	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	381	385	first strand
Strand 2	A	388	392	anti-parallel
Strand 3	A	404	408	anti-parallel
Strand 4	A	413	417	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	428	432	first strand
Strand 2	A	435	439	anti-parallel
Strand 3	A	451	455	anti-parallel
Strand 4	A	460	464	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	475	479	first strand
Strand 2	A	482	489	anti-parallel
Strand 3	A	494	502	anti-parallel
Strand 4	A	507	511	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	522	526	first strand
Strand 2	A	529	533	anti-parallel
Strand 3	A	545	549	anti-parallel
Strand 4	A	554	558	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	569	573	first strand
Strand 2	A	576	580	anti-parallel
Strand 3	A	592	596	anti-parallel
Strand 4	A	601	605	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	366	370	first strand
Strand 2	B	357	361	anti-parallel
Strand 3	B	339	345	anti-parallel
Strand 4	B	616	622	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	348	349	first strand
Strand 2	B	352	353	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	381	385	first strand
Strand 2	B	388	392	anti-parallel
Strand 3	B	404	408	anti-parallel
Strand 4	B	413	417	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	428	432	first strand
Strand 2	B	435	439	anti-parallel
Strand 3	B	451	455	anti-parallel
Strand 4	B	460	464	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	475	479	first strand
Strand 2	B	482	489	anti-parallel
Strand 3	B	494	502	anti-parallel
Strand 4	B	507	511	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	522	526	first strand
Strand 2	B	529	533	anti-parallel
Strand 3	B	545	549	anti-parallel
Strand 4	B	554	558	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	569	573	first strand
Strand 2	B	576	580	anti-parallel
Strand 3	B	592	596	anti-parallel
Strand 4	B	601	605	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6HRL

Analysis of interatomic Contacts of Structural Units in PDB entry:
6HRL