Analysis of interatomic Contacts of Structural Units in PDB entry:
6HS3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6HS3 entry

There are 2 chains in PDB entry 6HS3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 13MET 258
B
 GLN 8PHE 256
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 6HS3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
53 63Right-handed alpha
Helix 2
AA2
A
83 90Right-handed alpha
Helix 3
AA3
A
106 116Right-handed alpha
Helix 4
AA4
A
127 142Right-handed alpha
Helix 5
AA5
A
144 148Right-handed 310
Helix 6
AA6
A
151 155Right-handed 310
Helix 7
AA7
A
156 170Right-handed alpha
Helix 8
AA8
A
186 203Right-handed alpha
Helix 9
AA9
A
213 219Right-handed alpha
Helix 10
AB1
A
237 243Right-handed alpha
Helix 11
AB2
A
244 251Right-handed alpha
Helix 12
AB3
B
53 63Right-handed alpha
Helix 13
AB4
B
83 90Right-handed alpha
Helix 14
AB5
B
106 116Right-handed alpha
Helix 15
AB6
B
127 142Right-handed alpha
Helix 16
AB7
B
144 148Right-handed 310
Helix 17
AB8
B
151 155Right-handed 310
Helix 18
AB9
B
156 170Right-handed alpha
Helix 19
AC1
B
186 203Right-handed alpha
Helix 20
AC2
B
213 219Right-handed alpha
Helix 21
AC3
B
237 243Right-handed alpha
Helix 22
AC4
B
244 251Right-handed alpha
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There are 4 sheets in PDB entry 6HS3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 39first strand
Strand 2
A
15 25anti-parallel
Strand 3
A
69 74anti-parallel
Strand 4
A
77 78anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
92 95first strand
Strand 2
A
175 179parallel
Strand 3
A
206 210parallel
Strand 4
A
43 47parallel
Strand 5
A
223 228parallel
Strand 6
A
231 236anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
29 39first strand
Strand 2
B
15 24anti-parallel
Strand 3
B
69 74anti-parallel
Strand 4
B
77 78anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
92 95first strand
Strand 2
B
175 179parallel
Strand 3
B
206 210parallel
Strand 4
B
43 47parallel
Strand 5
B
223 228parallel
Strand 6
B
231 236anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il