Analysis of interatomic Contacts of Structural Units in PDB entry:
6HSQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6HSQ entry

There are 4 chains in PDB entry 6HSQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2ILE 149
B
 SER -1ILE 149
C
 MET 1ILE 149
D
 GLY -2ILE 149
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 6HSQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 18Right-handed 310
Helix 2
AA2
A
22 27Right-handed alpha
Helix 3
AA3
A
30 44Right-handed alpha
Helix 4
AA4
A
56 68Right-handed alpha
Helix 5
AA5
A
78 84Right-handed 310
Helix 6
AA6
A
85 96Right-handed alpha
Helix 7
AA7
A
106 110Right-handed 310
Helix 8
AA8
A
111 116Right-handed 310
Helix 9
AA9
A
132 148Right-handed alpha
Helix 10
AB1
B
14 18Right-handed 310
Helix 11
AB2
B
22 27Right-handed alpha
Helix 12
AB3
B
30 45Right-handed alpha
Helix 13
AB4
B
56 68Right-handed alpha
Helix 14
AB5
B
78 84Right-handed 310
Helix 15
AB6
B
85 96Right-handed alpha
Helix 16
AB7
B
106 110Right-handed 310
Helix 17
AB8
B
111 116Right-handed 310
Helix 18
AB9
B
132 148Right-handed alpha
Helix 19
AC1
C
14 18Right-handed 310
Helix 20
AC2
C
22 27Right-handed alpha
Helix 21
AC3
C
30 45Right-handed alpha
Helix 22
AC4
C
56 68Right-handed alpha
Helix 23
AC5
C
78 84Right-handed 310
Helix 24
AC6
C
85 96Right-handed alpha
Helix 25
AC7
C
106 110Right-handed 310
Helix 26
AC8
C
111 116Right-handed 310
Helix 27
AC9
C
132 148Right-handed alpha
Helix 28
AD1
D
14 18Right-handed 310
Helix 29
AD2
D
22 27Right-handed alpha
Helix 30
AD3
D
30 44Right-handed alpha
Helix 31
AD4
D
56 67Right-handed alpha
Helix 32
AD5
D
78 84Right-handed 310
Helix 33
AD6
D
85 96Right-handed alpha
Helix 34
AD7
D
106 110Right-handed 310
Helix 35
AD8
D
111 116Right-handed 310
Helix 36
AD9
D
132 148Right-handed alpha
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There are 3 sheets in PDB entry 6HSQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 53first strand
Strand 2
A
5 11parallel
Strand 3
A
73 77parallel
Strand 4
A
99 103parallel
Strand 5
A
125 128parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
47 53first strand
Strand 2
B
5 11parallel
Strand 3
B
73 77parallel
Strand 4
B
99 103parallel
Strand 5
B
125 128parallel
Strand 6
D
125 128anti-parallel
Strand 7
D
99 103parallel
Strand 8
D
73 77parallel
Strand 9
D
5 11parallel
Strand 10
D
47 53parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
47 53first strand
Strand 2
C
5 11parallel
Strand 3
C
73 77parallel
Strand 4
C
99 103parallel
Strand 5
C
125 128parallel
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