Analysis of interatomic Contacts of Structural Units in PDB entry:
6HSV

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6HSV entry

There are 12 chains in PDB entry 6HSV (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 1	GLY 104
B	THR 1	ASN 103
C	THR 1	ASN 103
D	THR 1	ASN 103
E	THR 1	GLU 123
F	THR 1	GLU 123
G	THR 1	GLU 123
H	THR 1	GLY 104
I	THR 1	ASN 103
J	THR 1	GLU 123
K	THR 1	ASN 103
L	THR 1	LYS 81

There are 56 helices in PDB entry 6HSV. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	4	10	Right-handed alpha
Helix 2	AA2	A	60	79	Right-handed alpha
Helix 3	AA3	B	4	10	Right-handed alpha
Helix 4	AA4	B	60	79	Right-handed alpha
Helix 5	AA5	C	4	10	Right-handed alpha
Helix 6	AA6	C	61	79	Right-handed alpha
Helix 7	AA7	D	4	10	Right-handed alpha
Helix 8	AA8	D	60	79	Right-handed alpha
Helix 9	AA9	E	4	10	Right-handed alpha
Helix 10	AB1	E	58	60	Right-handed 310
Helix 11	AB2	E	61	79	Right-handed alpha
Helix 12	AB3	E	108	113	Right-handed alpha
Helix 13	AB4	E	118	123	Right-handed alpha
Helix 14	AB5	F	4	10	Right-handed alpha
Helix 15	AB6	F	60	79	Right-handed alpha
Helix 16	AB7	F	108	113	Right-handed alpha
Helix 17	AB8	G	4	10	Right-handed alpha
Helix 18	AB9	G	60	79	Right-handed alpha
Helix 19	AC1	G	108	113	Right-handed alpha
Helix 20	AC2	G	118	123	Right-handed alpha
Helix 21	AC3	H	4	10	Right-handed alpha
Helix 22	AC4	H	60	79	Right-handed alpha
Helix 23	AC5	I	4	10	Right-handed alpha
Helix 24	AC6	I	60	79	Right-handed alpha
Helix 25	AC7	J	4	10	Right-handed alpha
Helix 26	AC8	J	60	79	Right-handed alpha
Helix 27	AC9	J	108	113	Right-handed alpha
Helix 28	AD1	K	4	10	Right-handed alpha
Helix 29	AD2	K	60	79	Right-handed alpha
Helix 30	AD3	L	4	10	Right-handed alpha
Helix 31	AD4	L	60	79	Right-handed alpha
Helix 32	AD5	L	108	113	Right-handed alpha
Helix 33	AD6	L	118	123	Right-handed alpha
Helix 34	AD7	M	4	10	Right-handed alpha
Helix 35	AD8	M	60	79	Right-handed alpha
Helix 36	AD9	M	108	113	Right-handed alpha
Helix 37	AE1	M	118	123	Right-handed alpha
Helix 38	AE2	N	4	10	Right-handed alpha
Helix 39	AE3	N	60	79	Right-handed alpha
Helix 40	AE4	N	108	113	Right-handed alpha
Helix 41	AE5	O	4	10	Right-handed alpha
Helix 42	AE6	O	60	79	Right-handed alpha
Helix 43	AE7	O	108	113	Right-handed alpha
Helix 44	AE8	O	118	123	Right-handed alpha
Helix 45	AE9	P	4	10	Right-handed alpha
Helix 46	AF1	P	60	79	Right-handed alpha
Helix 47	AF2	P	108	113	Right-handed alpha
Helix 48	AF3	P	118	123	Right-handed alpha
Helix 49	AF4	Q	4	10	Right-handed alpha
Helix 50	AF5	Q	60	79	Right-handed alpha
Helix 51	AF6	R	4	10	Right-handed alpha
Helix 52	AF7	R	60	79	Right-handed alpha
Helix 53	AF8	S	4	10	Right-handed alpha
Helix 54	AF9	S	58	79	Right-handed alpha
Helix 55	AG1	T	4	10	Right-handed alpha
Helix 56	AG2	T	60	79	Right-handed alpha

There are 40 sheets in PDB entry 6HSV. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	15	19	first strand
Strand 2	A	82	88	anti-parallel
Strand 3	A	98	101	anti-parallel

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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	26	30	first strand
Strand 2	A	37	41	anti-parallel
Strand 3	A	47	50	anti-parallel

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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	15	19	first strand
Strand 2	B	84	88	anti-parallel
Strand 3	B	95	100	anti-parallel

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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	26	30	first strand
Strand 2	B	37	41	anti-parallel
Strand 3	B	47	50	anti-parallel

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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	15	19	first strand
Strand 2	C	82	88	anti-parallel
Strand 3	C	98	101	anti-parallel

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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	26	30	first strand
Strand 2	C	37	41	anti-parallel
Strand 3	C	47	50	anti-parallel

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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	15	19	first strand
Strand 2	D	82	88	anti-parallel
Strand 3	D	98	101	anti-parallel

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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	26	30	first strand
Strand 2	D	37	41	anti-parallel
Strand 3	D	47	50	anti-parallel

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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	15	19	first strand
Strand 2	E	82	88	anti-parallel
Strand 3	E	98	101	anti-parallel

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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	26	30	first strand
Strand 2	E	37	41	anti-parallel
Strand 3	E	47	50	anti-parallel

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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	15	19	first strand
Strand 2	F	84	88	anti-parallel
Strand 3	F	95	100	anti-parallel

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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	26	30	first strand
Strand 2	F	37	41	anti-parallel
Strand 3	F	47	50	anti-parallel

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There are 3 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	15	19	first strand
Strand 2	G	82	88	anti-parallel
Strand 3	G	98	101	anti-parallel

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There are 3 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	26	30	first strand
Strand 2	G	37	41	anti-parallel
Strand 3	G	47	50	anti-parallel

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There are 3 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	15	19	first strand
Strand 2	H	82	88	anti-parallel
Strand 3	H	98	101	anti-parallel

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There are 3 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	26	30	first strand
Strand 2	H	37	41	anti-parallel
Strand 3	H	47	50	anti-parallel

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There are 3 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	15	19	first strand
Strand 2	I	82	88	anti-parallel
Strand 3	I	98	101	anti-parallel

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There are 3 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	26	30	first strand
Strand 2	I	37	41	anti-parallel
Strand 3	I	47	50	anti-parallel

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There are 3 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	15	19	first strand
Strand 2	J	82	88	anti-parallel
Strand 3	J	98	101	anti-parallel

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There are 3 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	26	30	first strand
Strand 2	J	37	41	anti-parallel
Strand 3	J	47	50	anti-parallel

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There are 3 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	15	19	first strand
Strand 2	K	82	88	anti-parallel
Strand 3	K	98	101	anti-parallel

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There are 3 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	26	30	first strand
Strand 2	K	37	41	anti-parallel
Strand 3	K	47	50	anti-parallel

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There are 3 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	15	19	first strand
Strand 2	L	82	88	anti-parallel
Strand 3	L	98	101	anti-parallel

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There are 3 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	26	30	first strand
Strand 2	L	37	41	anti-parallel
Strand 3	L	47	50	anti-parallel

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There are 3 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	15	19	first strand
Strand 2	M	82	88	anti-parallel
Strand 3	M	98	101	anti-parallel

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There are 3 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	26	30	first strand
Strand 2	M	37	41	anti-parallel
Strand 3	M	47	50	anti-parallel

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There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	15	19	first strand
Strand 2	N	82	88	anti-parallel
Strand 3	N	98	101	anti-parallel

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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	26	30	first strand
Strand 2	N	37	41	anti-parallel
Strand 3	N	47	50	anti-parallel

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There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	15	19	first strand
Strand 2	O	82	88	anti-parallel
Strand 3	O	98	101	anti-parallel

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There are 3 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	26	30	first strand
Strand 2	O	37	41	anti-parallel
Strand 3	O	47	50	anti-parallel

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There are 3 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	15	19	first strand
Strand 2	P	82	88	anti-parallel
Strand 3	P	98	101	anti-parallel

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There are 3 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	26	30	first strand
Strand 2	P	37	41	anti-parallel
Strand 3	P	47	50	anti-parallel

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There are 3 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	15	19	first strand
Strand 2	Q	82	88	anti-parallel
Strand 3	Q	98	101	anti-parallel

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There are 3 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	26	30	first strand
Strand 2	Q	37	41	anti-parallel
Strand 3	Q	47	50	anti-parallel

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There are 3 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	15	19	first strand
Strand 2	R	82	88	anti-parallel
Strand 3	R	98	101	anti-parallel

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There are 3 strands in AJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	26	30	first strand
Strand 2	R	37	41	anti-parallel
Strand 3	R	47	50	anti-parallel

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There are 3 strands in AK sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	15	19	first strand
Strand 2	S	84	88	anti-parallel
Strand 3	S	95	100	anti-parallel

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There are 3 strands in AL sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	26	30	first strand
Strand 2	S	37	41	anti-parallel
Strand 3	S	47	50	anti-parallel

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There are 3 strands in AM sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	15	19	first strand
Strand 2	T	84	88	anti-parallel
Strand 3	T	95	100	anti-parallel

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There are 3 strands in AN sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	26	30	first strand
Strand 2	T	37	41	anti-parallel
Strand 3	T	47	50	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6HSV

Analysis of interatomic Contacts of Structural Units in PDB entry:
6HSV