Analysis of interatomic Contacts of Structural Units in PDB entry:
6HTF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6HTF entry

There are 2 chains in PDB entry 6HTF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 276GLN 379
B
 PRO 9PRO 266
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 6HTF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
287 299Right-handed alpha
Helix 2
AA2
A
354 363Right-handed alpha
Helix 3
AA3
B
16 27Right-handed alpha
Helix 4
AA4
B
37 44Right-handed alpha
Helix 5
AA5
B
57 63Right-handed 310
Helix 6
AA6
B
79 85Right-handed 310
Helix 7
AA7
B
225 235Right-handed alpha
Helix 8
AA8
B
236 239Right-handed 310
Helix 9
AA9
B
247 251Right-handed 310
Helix 10
AB1
B
259 263Right-handed 310
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There are 3 sheets in PDB entry 6HTF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
330 335first strand
Strand 2
A
315 321anti-parallel
Strand 3
A
303 308anti-parallel
Strand 4
A
375 376parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
337 338first strand
Strand 2
A
344 345anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
46 49first strand
Strand 2
B
68 72parallel
Strand 3
B
90 94parallel
Strand 4
B
114 116parallel
Strand 5
B
138 140parallel
Strand 6
B
162 164parallel
Strand 7
B
186 188parallel
Strand 8
B
210 212parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il