Analysis of interatomic Contacts of Structural Units in PDB entry:
6HUH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6HUH entry

There are 4 chains in PDB entry 6HUH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 24PHE 53
A
 ILE 55VAL 265
B
 THR 24PHE 53
B
 ILE 55VAL 265
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 20 helices in PDB entry 6HUH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
49 52Right-handed 310
Helix 2
AA2
A
53 65Right-handed alpha
Helix 3
AA3
A
85 89Right-handed 310
Helix 4
AA4
A
93 100Right-handed alpha
Helix 5
AA5
A
102 114Right-handed alpha
Helix 6
AA6
A
114 125Right-handed alpha
Helix 7
AA7
A
140 145Right-handed alpha
Helix 8
AA8
A
154 167Right-handed alpha
Helix 9
AA9
A
173 184Right-handed alpha
Helix 10
AB1
A
244 265Right-handed alpha
Helix 11
AB2
B
49 52Right-handed 310
Helix 12
AB3
B
53 65Right-handed alpha
Helix 13
AB4
B
85 89Right-handed 310
Helix 14
AB5
B
93 100Right-handed alpha
Helix 15
AB6
B
102 114Right-handed alpha
Helix 16
AB7
B
114 125Right-handed alpha
Helix 17
AB8
B
140 145Right-handed alpha
Helix 18
AB9
B
154 167Right-handed alpha
Helix 19
AC1
B
173 184Right-handed alpha
Helix 20
AC2
B
245 265Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 6HUH. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 41first strand
Strand 2
A
26 30anti-parallel
Strand 3
A
228 238anti-parallel
Strand 4
A
215 225anti-parallel
Strand 5
A
192 201anti-parallel
Strand 6
A
185 189anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
36 38first strand
Strand 2
B
26 30anti-parallel
Strand 3
B
228 238anti-parallel
Strand 4
B
215 225anti-parallel
Strand 5
B
192 201anti-parallel
Strand 6
B
185 189anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il