Analysis of interatomic Contacts of Structural Units in PDB entry:
6HUK

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6HUK entry

There are 6 chains in PDB entry 6HUK (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 10	ARG 418
B	ASN 8	VAL 447
C	ASP 26	LEU 436
D	LYS 9	ARG 418
E	ASN 8	VAL 447
G	GLN 1	SER 529

There are 51 helices in PDB entry 6HUK. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	10	23	Right-handed alpha
Helix 2	AA2	A	72	76	Right-handed 310
Helix 3	AA3	A	87	92	Right-handed alpha
Helix 4	AA4	A	174	178	Right-handed alpha
Helix 5	AA5	A	223	230	Right-handed alpha
Helix 6	AA6	A	230	244	Right-handed alpha
Helix 7	AA7	A	245	247	Right-handed 310
Helix 8	AA8	A	251	276	Right-handed alpha
Helix 9	AA9	A	284	309	Right-handed alpha
Helix 10	AB1	A	390	416	Right-handed alpha
Helix 11	AB2	B	9	20	Right-handed alpha
Helix 12	AB3	B	70	73	Right-handed 310
Helix 13	AB4	B	84	88	Right-handed 310
Helix 14	AB5	B	218	225	Right-handed alpha
Helix 15	AB6	B	226	236	Right-handed alpha
Helix 16	AB7	B	237	242	Right-handed 310
Helix 17	AB8	B	246	272	Right-handed alpha
Helix 18	AB9	B	279	307	Right-handed alpha
Helix 19	AC1	B	419	446	Right-handed alpha
Helix 20	AC2	C	27	36	Right-handed alpha
Helix 21	AC3	C	85	88	Right-handed 310
Helix 22	AC4	C	102	106	Right-handed 310
Helix 23	AC5	C	240	253	Right-handed alpha
Helix 24	AC6	C	254	257	Right-handed 310
Helix 25	AC7	C	261	281	Right-handed alpha
Helix 26	AC8	C	282	285	Right-handed 310
Helix 27	AC9	C	294	320	Right-handed alpha
Helix 28	AD1	C	406	408	Right-handed 310
Helix 29	AD2	C	409	435	Right-handed alpha
Helix 30	AD3	D	10	21	Right-handed alpha
Helix 31	AD4	D	72	76	Right-handed 310
Helix 32	AD5	D	87	92	Right-handed alpha
Helix 33	AD6	D	142	146	Right-handed 310
Helix 34	AD7	D	174	179	Right-handed alpha
Helix 35	AD8	D	223	230	Right-handed alpha
Helix 36	AD9	D	230	244	Right-handed alpha
Helix 37	AE1	D	245	247	Right-handed 310
Helix 38	AE2	D	251	275	Right-handed alpha
Helix 39	AE3	D	284	309	Right-handed alpha
Helix 40	AE4	D	390	415	Right-handed alpha
Helix 41	AE5	E	9	20	Right-handed alpha
Helix 42	AE6	E	84	88	Right-handed 310
Helix 43	AE7	E	139	143	Right-handed 310
Helix 44	AE8	E	170	174	Right-handed 310
Helix 45	AE9	E	218	225	Right-handed alpha
Helix 46	AF1	E	225	237	Right-handed alpha
Helix 47	AF2	E	238	242	Right-handed 310
Helix 48	AF3	E	246	272	Right-handed alpha
Helix 49	AF4	E	279	308	Right-handed alpha
Helix 50	AF5	E	420	446	Right-handed alpha
Helix 51	AF6	G	492	496	Right-handed 310

There are 25 sheets in PDB entry 6HUK. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	167	169	first strand
Strand 2	A	39	50	parallel
Strand 3	A	61	70	anti-parallel
Strand 4	A	127	136	anti-parallel
Strand 5	A	119	121	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	45	47	first strand
Strand 2	A	179	181	parallel

Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	99	101	first strand
Strand 2	A	157	159	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	150	155	first strand
Strand 2	A	215	221	anti-parallel
Strand 3	A	191	193	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	196	204	first strand
Strand 2	A	209	217	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	164	168	first strand
Strand 2	B	36	47	parallel
Strand 3	B	59	68	anti-parallel
Strand 4	B	123	132	anti-parallel
Strand 5	B	104	106	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	96	98	first strand
Strand 2	B	151	156	anti-parallel
Strand 3	B	204	211	anti-parallel
Strand 4	B	192	199	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	114	118	first strand
Strand 2	B	124	128	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	186	188	first strand
Strand 2	B	214	216	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	179	183	first strand
Strand 2	C	51	62	parallel
Strand 3	C	71	83	anti-parallel
Strand 4	C	138	150	anti-parallel
Strand 5	C	131	134	anti-parallel
Strand 6	C	95	98	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	57	59	first strand
Strand 2	C	188	190	parallel

Back to list of sheets
Back to top of page

There are 2 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	111	113	first strand
Strand 2	C	169	171	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	163	165	first strand
Strand 2	C	219	231	anti-parallel
Strand 3	C	201	214	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	116	121	first strand
Strand 2	C	145	149	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	167	171	first strand
Strand 2	D	39	47	parallel
Strand 3	D	59	69	anti-parallel
Strand 4	D	129	138	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	83	85	first strand
Strand 2	D	120	122	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	99	101	first strand
Strand 2	D	157	159	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	150	154	first strand
Strand 2	D	209	220	anti-parallel
Strand 3	D	196	204	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	164	168	first strand
Strand 2	E	36	47	parallel
Strand 3	E	56	66	anti-parallel
Strand 4	E	129	135	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	65	68	first strand
Strand 2	E	123	128	anti-parallel
Strand 3	E	114	118	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	151	155	first strand
Strand 2	E	205	211	anti-parallel
Strand 3	E	193	198	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	186	188	first strand
Strand 2	E	214	216	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	3	6	first strand
Strand 2	G	423	431	anti-parallel
Strand 3	G	483	489	anti-parallel
Strand 4	G	474	478	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	523	525	first strand
Strand 2	G	497	504	anti-parallel
Strand 3	G	439	446	anti-parallel
Strand 4	G	450	457	anti-parallel
Strand 5	G	463	465	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	502	504	first strand
Strand 2	G	516	519	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6HUK

Analysis of interatomic Contacts of Structural Units in PDB entry:
6HUK