Analysis of interatomic Contacts of Structural Units in PDB entry:
6HUO

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6HUO entry

There are 6 chains in PDB entry 6HUO (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 13	ARG 418
B	ASN 8	VAL 447
C	ASP 26	LEU 436
D	THR 13	ARG 418
E	ASN 8	VAL 447
G	GLN 1	SER 529

There are 53 helices in PDB entry 6HUO. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	13	23	Right-handed alpha
Helix 2	AA2	A	73	76	Right-handed 310
Helix 3	AA3	A	89	93	Right-handed 310
Helix 4	AA4	A	142	146	Right-handed 310
Helix 5	AA5	A	174	177	Right-handed 310
Helix 6	AA6	A	223	230	Right-handed alpha
Helix 7	AA7	A	230	242	Right-handed alpha
Helix 8	AA8	A	243	246	Right-handed 310
Helix 9	AA9	A	251	276	Right-handed alpha
Helix 10	AB1	A	284	310	Right-handed alpha
Helix 11	AB2	A	390	416	Right-handed alpha
Helix 12	AB3	B	9	20	Right-handed alpha
Helix 13	AB4	B	70	73	Right-handed 310
Helix 14	AB5	B	84	91	Right-handed 310
Helix 15	AB6	B	218	223	Right-handed alpha
Helix 16	AB7	B	225	236	Right-handed alpha
Helix 17	AB8	B	237	241	Right-handed 310
Helix 18	AB9	B	246	271	Right-handed alpha
Helix 19	AC1	B	281	308	Right-handed alpha
Helix 20	AC2	B	419	446	Right-handed alpha
Helix 21	AC3	C	27	35	Right-handed alpha
Helix 22	AC4	C	85	88	Right-handed 310
Helix 23	AC5	C	102	106	Right-handed 310
Helix 24	AC6	C	233	238	Right-handed alpha
Helix 25	AC7	C	240	253	Right-handed alpha
Helix 26	AC8	C	254	257	Right-handed 310
Helix 27	AC9	C	261	287	Right-handed alpha
Helix 28	AD1	C	294	322	Right-handed alpha
Helix 29	AD2	C	409	435	Right-handed alpha
Helix 30	AD3	D	14	23	Right-handed alpha
Helix 31	AD4	D	73	76	Right-handed 310
Helix 32	AD5	D	89	93	Right-handed 310
Helix 33	AD6	D	142	146	Right-handed 310
Helix 34	AD7	D	174	178	Right-handed 310
Helix 35	AD8	D	223	230	Right-handed alpha
Helix 36	AD9	D	230	242	Right-handed alpha
Helix 37	AE1	D	243	247	Right-handed 310
Helix 38	AE2	D	251	275	Right-handed alpha
Helix 39	AE3	D	284	308	Right-handed alpha
Helix 40	AE4	D	390	415	Right-handed alpha
Helix 41	AE5	E	9	18	Right-handed alpha
Helix 42	AE6	E	70	73	Right-handed 310
Helix 43	AE7	E	84	91	Right-handed 310
Helix 44	AE8	E	139	143	Right-handed 310
Helix 45	AE9	E	170	174	Right-handed 310
Helix 46	AF1	E	218	225	Right-handed alpha
Helix 47	AF2	E	225	235	Right-handed alpha
Helix 48	AF3	E	236	241	Right-handed 310
Helix 49	AF4	E	246	270	Right-handed alpha
Helix 50	AF5	E	279	307	Right-handed alpha
Helix 51	AF6	E	420	446	Right-handed alpha
Helix 52	AF7	G	492	496	Right-handed 310
Helix 53	AF8	G	512	516	Right-handed 310

There are 17 sheets in PDB entry 6HUO. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	167	171	first strand
Strand 2	A	39	49	parallel
Strand 3	A	59	71	anti-parallel
Strand 4	A	126	138	anti-parallel
Strand 5	A	117	122	anti-parallel
Strand 6	A	83	86	anti-parallel

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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	45	47	first strand
Strand 2	A	179	181	parallel

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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	99	101	first strand
Strand 2	A	150	159	anti-parallel
Strand 3	A	211	220	anti-parallel
Strand 4	A	193	202	anti-parallel

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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	164	168	first strand
Strand 2	B	36	47	parallel
Strand 3	B	57	68	anti-parallel
Strand 4	B	123	134	anti-parallel
Strand 5	B	116	118	anti-parallel

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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	96	98	first strand
Strand 2	B	147	156	anti-parallel
Strand 3	B	204	216	anti-parallel
Strand 4	B	186	199	anti-parallel

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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	101	106	first strand
Strand 2	B	130	134	anti-parallel

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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	179	183	first strand
Strand 2	C	51	62	parallel
Strand 3	C	71	83	anti-parallel
Strand 4	C	138	150	anti-parallel
Strand 5	C	129	134	anti-parallel
Strand 6	C	95	98	anti-parallel

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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	57	59	first strand
Strand 2	C	188	190	parallel

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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	111	113	first strand
Strand 2	C	163	171	anti-parallel
Strand 3	C	219	231	anti-parallel
Strand 4	C	201	214	anti-parallel

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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	116	121	first strand
Strand 2	C	145	149	anti-parallel

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There are 6 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	167	171	first strand
Strand 2	D	39	49	parallel
Strand 3	D	59	71	anti-parallel
Strand 4	D	126	138	anti-parallel
Strand 5	D	117	121	anti-parallel
Strand 6	D	84	86	anti-parallel

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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	150	158	first strand
Strand 2	D	212	221	anti-parallel
Strand 3	D	191	193	anti-parallel

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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	196	205	first strand
Strand 2	D	208	217	anti-parallel

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There are 6 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	164	168	first strand
Strand 2	E	36	47	parallel
Strand 3	E	56	68	anti-parallel
Strand 4	E	123	135	anti-parallel
Strand 5	E	114	118	anti-parallel
Strand 6	E	81	83	anti-parallel

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There are 4 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	96	98	first strand
Strand 2	E	147	156	anti-parallel
Strand 3	E	204	215	anti-parallel
Strand 4	E	188	199	anti-parallel

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There are 4 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	5	7	first strand
Strand 2	G	424	429	anti-parallel
Strand 3	G	483	488	anti-parallel
Strand 4	G	474	478	anti-parallel

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There are 4 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	498	504	first strand
Strand 2	G	439	446	anti-parallel
Strand 3	G	450	457	anti-parallel
Strand 4	G	463	465	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6HUO

Analysis of interatomic Contacts of Structural Units in PDB entry:
6HUO