Analysis of interatomic Contacts of Structural Units in PDB entry:
6HV6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6HV6 entry

There is 1 chain in PDB entry 6HV6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 1730ASP 2032
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 6HV6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1745 1760Right-handed alpha
Helix 2
AA2
A
1766 1782Right-handed alpha
Helix 3
AA3
A
1785 1792Right-handed 310
Helix 4
AA4
A
1795 1805Right-handed alpha
Helix 5
AA5
A
1809 1843Right-handed alpha
Helix 6
AA6
A
1853 1858Right-handed alpha
Helix 7
AA7
A
1864 1878Right-handed alpha
Helix 8
AA8
A
1880 1891Right-handed alpha
Helix 9
AA9
A
1892 1894Right-handed 310
Helix 10
AB1
A
1896 1899Right-handed 310
Helix 11
AB2
A
1900 1911Right-handed alpha
Helix 12
AB3
A
1914 1919Right-handed 310
Helix 13
AB4
A
1932 1935Right-handed 310
Helix 14
AB5
A
1936 1941Right-handed alpha
Helix 15
AB6
A
1985 2001Right-handed alpha
Helix 16
AB7
A
2003 2007Right-handed 310
Helix 17
AB8
A
2026 2032Right-handed alpha
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There are 2 sheets in PDB entry 6HV6. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1731 1734first strand
Strand 2
A
1737 1740anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1848 1851first strand
Strand 2
A
1979 1983anti-parallel
Strand 3
A
1970 1975anti-parallel
Strand 4
A
1955 1962anti-parallel
Strand 5
A
1946 1952anti-parallel
Strand 6
A
2008 2012anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il