Analysis of interatomic Contacts of Structural Units in PDB entry:
6HVG

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6HVG entry

There is 1 chain in PDB entry 6HVG (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 147	MET 1422

There are 76 helices in PDB entry 6HVG. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	403	408	Right-handed alpha
Helix 2	AA2	A	438	440	Right-handed 310
Helix 3	AA3	A	454	456	Right-handed 310
Helix 4	AA4	A	460	473	Right-handed alpha
Helix 5	AA5	A	487	510	Right-handed alpha
Helix 6	AA6	A	512	526	Right-handed alpha
Helix 7	AA7	A	527	534	Right-handed 310
Helix 8	AA8	A	539	544	Right-handed 310
Helix 9	AA9	A	558	562	Right-handed 310
Helix 10	AB1	A	572	576	Right-handed 310
Helix 11	AB2	A	600	616	Right-handed alpha
Helix 12	AB3	A	616	623	Right-handed alpha
Helix 13	AB4	A	636	641	Right-handed 310
Helix 14	AB5	A	642	657	Right-handed alpha
Helix 15	AB6	A	661	667	Right-handed alpha
Helix 16	AB7	A	678	686	Right-handed alpha
Helix 17	AB8	A	694	705	Right-handed alpha
Helix 18	AB9	A	714	719	Right-handed 310
Helix 19	AC1	A	720	728	Right-handed 310
Helix 20	AC2	A	770	781	Right-handed alpha
Helix 21	AC3	A	792	808	Right-handed alpha
Helix 22	AC4	A	820	829	Right-handed alpha
Helix 23	AC5	A	840	844	Right-handed alpha
Helix 24	AC6	A	857	872	Right-handed alpha
Helix 25	AC7	A	917	922	Right-handed 310
Helix 26	AC8	A	971	974	Right-handed 310
Helix 27	AC9	A	1051	1056	Right-handed alpha
Helix 28	AD1	A	1072	1075	Right-handed 310
Helix 29	AD2	A	1076	1090	Right-handed alpha
Helix 30	AD3	A	1115	1120	Right-handed alpha
Helix 31	AD4	A	1148	1162	Right-handed alpha
Helix 32	AD5	A	1216	1222	Right-handed alpha
Helix 33	AD6	A	1225	1233	Right-handed alpha
Helix 34	AD7	A	1233	1239	Right-handed alpha
Helix 35	AD8	A	1258	1260	Right-handed 310
Helix 36	AD9	A	1289	1293	Right-handed 310
Helix 37	AE1	A	1296	1301	Right-handed 310
Helix 38	AE2	A	1363	1367	Right-handed 310
Helix 39	AE3	B	402	408	Right-handed alpha
Helix 40	AE4	B	438	440	Right-handed 310
Helix 41	AE5	B	454	456	Right-handed 310
Helix 42	AE6	B	460	474	Right-handed alpha
Helix 43	AE7	B	487	510	Right-handed alpha
Helix 44	AE8	B	512	526	Right-handed alpha
Helix 45	AE9	B	527	534	Right-handed 310
Helix 46	AF1	B	539	544	Right-handed 310
Helix 47	AF2	B	558	562	Right-handed 310
Helix 48	AF3	B	572	576	Right-handed 310
Helix 49	AF4	B	600	616	Right-handed alpha
Helix 50	AF5	B	616	623	Right-handed alpha
Helix 51	AF6	B	636	641	Right-handed 310
Helix 52	AF7	B	642	657	Right-handed alpha
Helix 53	AF8	B	661	667	Right-handed alpha
Helix 54	AF9	B	678	686	Right-handed alpha
Helix 55	AG1	B	694	705	Right-handed alpha
Helix 56	AG2	B	714	719	Right-handed 310
Helix 57	AG3	B	720	728	Right-handed 310
Helix 58	AG4	B	770	781	Right-handed alpha
Helix 59	AG5	B	792	808	Right-handed alpha
Helix 60	AG6	B	820	829	Right-handed alpha
Helix 61	AG7	B	840	844	Right-handed alpha
Helix 62	AG8	B	857	872	Right-handed alpha
Helix 63	AG9	B	917	922	Right-handed 310
Helix 64	AH1	B	947	951	Right-handed 310
Helix 65	AH2	B	971	975	Right-handed 310
Helix 66	AH3	B	1051	1056	Right-handed alpha
Helix 67	AH4	B	1072	1075	Right-handed 310
Helix 68	AH5	B	1076	1090	Right-handed alpha
Helix 69	AH6	B	1115	1120	Right-handed alpha
Helix 70	AH7	B	1148	1162	Right-handed alpha
Helix 71	AH8	B	1216	1222	Right-handed alpha
Helix 72	AH9	B	1225	1233	Right-handed alpha
Helix 73	AI1	B	1233	1239	Right-handed alpha
Helix 74	AI2	B	1258	1260	Right-handed 310
Helix 75	AI3	B	1289	1293	Right-handed 310
Helix 76	AI4	B	1363	1367	Right-handed 310

There are 44 sheets in PDB entry 6HVG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	158	161	first strand
Strand 2	A	164	167	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	177	181	first strand
Strand 2	A	184	188	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	199	202	first strand
Strand 2	A	205	208	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	219	223	first strand
Strand 2	A	226	230	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	240	243	first strand
Strand 2	A	249	252	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	263	265	first strand
Strand 2	A	268	270	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	282	284	first strand
Strand 2	A	291	293	anti-parallel
Strand 3	A	300	301	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	303	307	first strand
Strand 2	A	310	314	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	324	327	first strand
Strand 2	A	333	336	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	345	349	first strand
Strand 2	A	352	356	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	366	369	first strand
Strand 2	A	374	377	anti-parallel
Strand 3	A	384	385	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	397	398	first strand
Strand 2	A	1305	1310	anti-parallel
Strand 3	A	1315	1318	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	429	430	first strand
Strand 2	A	451	452	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	434	437	first strand
Strand 2	A	441	444	anti-parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1174	1175	first strand
Strand 2	A	594	596	anti-parallel
Strand 3	A	1262	1266	anti-parallel
Strand 4	A	548	551	anti-parallel
Strand 5	A	1180	1189	anti-parallel
Strand 6	A	1204	1211	anti-parallel

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There are 8 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	671	672	first strand
Strand 2	A	631	634	parallel
Strand 3	A	1165	1170	parallel
Strand 4	A	1095	1097	parallel
Strand 5	A	1059	1061	parallel
Strand 6	A	835	839	parallel
Strand 7	A	759	761	parallel
Strand 8	A	692	693	parallel

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There are 9 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	749	750	first strand
Strand 2	A	876	880	anti-parallel
Strand 3	A	895	899	anti-parallel
Strand 4	A	924	929	anti-parallel
Strand 5	A	1014	1023	anti-parallel
Strand 6	A	954	961	anti-parallel
Strand 7	A	976	979	anti-parallel
Strand 8	A	991	996	anti-parallel
Strand 9	A	1001	1005	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	966	968	first strand
Strand 2	A	954	961	anti-parallel
Strand 3	A	1014	1023	anti-parallel
Strand 4	A	1009	1011	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	941	945	first strand
Strand 2	A	985	989	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1103	1104	first strand
Strand 2	A	1126	1128	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1328	1331	first strand
Strand 2	A	1337	1340	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1356	1359	first strand
Strand 2	A	1368	1371	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1382	1385	first strand
Strand 2	A	1391	1394	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1404	1407	first strand
Strand 2	A	1413	1416	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	262	263	first strand
Strand 2	B	270	271	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	282	286	first strand
Strand 2	B	289	293	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	303	307	first strand
Strand 2	B	310	314	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	324	327	first strand
Strand 2	B	333	336	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	345	349	first strand
Strand 2	B	352	356	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	366	370	first strand
Strand 2	B	373	377	anti-parallel
Strand 3	B	384	385	anti-parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	397	398	first strand
Strand 2	B	1305	1310	anti-parallel
Strand 3	B	1315	1318	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	429	430	first strand
Strand 2	B	451	452	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	434	437	first strand
Strand 2	B	441	444	anti-parallel

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There are 6 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1174	1175	first strand
Strand 2	B	594	596	anti-parallel
Strand 3	B	1262	1266	anti-parallel
Strand 4	B	548	551	anti-parallel
Strand 5	B	1180	1189	anti-parallel
Strand 6	B	1204	1211	anti-parallel

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There are 8 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	671	672	first strand
Strand 2	B	631	634	parallel
Strand 3	B	1165	1170	parallel
Strand 4	B	1095	1097	parallel
Strand 5	B	1059	1061	parallel
Strand 6	B	835	839	parallel
Strand 7	B	759	761	parallel
Strand 8	B	692	693	parallel

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There are 7 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	749	750	first strand
Strand 2	B	876	880	anti-parallel
Strand 3	B	895	899	anti-parallel
Strand 4	B	924	929	anti-parallel
Strand 5	B	1014	1023	anti-parallel
Strand 6	B	954	961	anti-parallel
Strand 7	B	977	979	anti-parallel

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There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	966	968	first strand
Strand 2	B	954	961	anti-parallel
Strand 3	B	1014	1023	anti-parallel
Strand 4	B	1009	1011	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	941	945	first strand
Strand 2	B	985	989	anti-parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	991	995	first strand
Strand 2	B	1001	1005	anti-parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1103	1104	first strand
Strand 2	B	1126	1128	anti-parallel

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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1328	1331	first strand
Strand 2	B	1337	1340	anti-parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1356	1359	first strand
Strand 2	B	1368	1371	anti-parallel

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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1382	1385	first strand
Strand 2	B	1391	1394	anti-parallel

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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1405	1407	first strand
Strand 2	B	1413	1415	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6HVG

Analysis of interatomic Contacts of Structural Units in PDB entry:
6HVG