Analysis of interatomic Contacts of Structural Units in PDB entry:
6HW2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6HW2 entry

There are 3 chains in PDB entry 6HW2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 61SER 227
B
 ALA 110PRO 178
C
 PRO 114SER 176
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 6HW2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
63 88Right-handed alpha
Helix 2
AA2
A
103 107Right-handed 310
Helix 3
AA3
A
152 166Right-handed alpha
Helix 4
AA4
B
115 120Right-handed 310
Helix 5
AA5
B
153 160Right-handed alpha
Helix 6
AA6
B
160 172Right-handed alpha
Helix 7
AA7
C
115 120Right-handed 310
Helix 8
AA8
C
153 160Right-handed alpha
Helix 9
AA9
C
160 171Right-handed alpha
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There are 4 sheets in PDB entry 6HW2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
148 151first strand
Strand 2
A
135 140anti-parallel
Strand 3
A
124 130anti-parallel
Strand 4
A
94 98anti-parallel
Strand 5
A
212 215anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
173 176first strand
Strand 2
A
219 224parallel
Strand 3
C
172 173anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
123 130first strand
Strand 2
B
137 142anti-parallel
Strand 3
B
149 152anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
123 130first strand
Strand 2
C
137 142anti-parallel
Strand 3
C
149 152anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il