Analysis of interatomic Contacts of Structural Units in PDB entry:
6HWJ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6HWJ entry

There are 2 chains in PDB entry 6HWJ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	LEU 436
B	MET 1	PRO 293

There are 37 helices in PDB entry 6HWJ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	4	12	Right-handed alpha
Helix 2	AA2	A	13	18	Right-handed 310
Helix 3	AA3	A	24	28	Right-handed 310
Helix 4	AA4	A	78	89	Right-handed alpha
Helix 5	AA5	A	147	158	Right-handed alpha
Helix 6	AA6	A	194	207	Right-handed alpha
Helix 7	AA7	A	211	235	Right-handed alpha
Helix 8	AA8	A	242	264	Right-handed alpha
Helix 9	AA9	A	265	285	Right-handed alpha
Helix 10	AB1	A	286	290	Right-handed 310
Helix 11	AB2	A	302	304	Right-handed 310
Helix 12	AB3	A	325	329	Right-handed 310
Helix 13	AB4	A	335	357	Right-handed alpha
Helix 14	AB5	A	361	387	Right-handed alpha
Helix 15	AB6	A	389	393	Right-handed 310
Helix 16	AB7	A	394	396	Right-handed 310
Helix 17	AB8	A	397	417	Right-handed alpha
Helix 18	AB9	A	418	420	Right-handed 310
Helix 19	AC1	A	421	432	Right-handed alpha
Helix 20	AC2	B	4	11	Right-handed alpha
Helix 21	AC3	B	13	18	Right-handed 310
Helix 22	AC4	B	78	88	Right-handed alpha
Helix 23	AC5	B	147	158	Right-handed alpha
Helix 24	AC6	B	194	207	Right-handed alpha
Helix 25	AC7	B	211	235	Right-handed alpha
Helix 26	AC8	B	242	264	Right-handed alpha
Helix 27	AC9	B	265	284	Right-handed alpha
Helix 28	AD1	B	285	290	Right-handed 310
Helix 29	AD2	B	302	304	Right-handed 310
Helix 30	AD3	B	325	329	Right-handed 310
Helix 31	AD4	B	335	357	Right-handed alpha
Helix 32	AD5	B	361	387	Right-handed alpha
Helix 33	AD6	B	389	393	Right-handed 310
Helix 34	AD7	B	394	396	Right-handed 310
Helix 35	AD8	B	397	417	Right-handed alpha
Helix 36	AD9	B	418	420	Right-handed 310
Helix 37	AE1	B	421	440	Right-handed alpha

There are 10 sheets in PDB entry 6HWJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	34	42	first strand
Strand 2	A	45	51	anti-parallel
Strand 3	A	57	65	anti-parallel
Strand 4	A	69	72	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	34	42	first strand
Strand 2	A	45	51	anti-parallel
Strand 3	A	57	65	anti-parallel
Strand 4	A	137	138	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	98	102	first strand
Strand 2	A	166	172	anti-parallel
Strand 3	A	179	186	anti-parallel
Strand 4	A	130	134	anti-parallel
Strand 5	A	123	126	anti-parallel
Strand 6	A	112	115	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	192	193	first strand
Strand 2	A	306	309	anti-parallel
Strand 3	A	312	315	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	239	240	first strand
Strand 2	A	293	295	anti-parallel
Strand 3	A	333	334	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	34	42	first strand
Strand 2	B	45	51	anti-parallel
Strand 3	B	57	64	anti-parallel
Strand 4	B	70	72	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	34	42	first strand
Strand 2	B	45	51	anti-parallel
Strand 3	B	57	64	anti-parallel
Strand 4	B	137	138	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	98	102	first strand
Strand 2	B	166	172	anti-parallel
Strand 3	B	179	186	anti-parallel
Strand 4	B	130	134	anti-parallel
Strand 5	B	124	126	anti-parallel
Strand 6	B	112	113	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	192	193	first strand
Strand 2	B	306	309	anti-parallel
Strand 3	B	312	315	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	239	240	first strand
Strand 2	B	293	295	anti-parallel
Strand 3	B	333	334	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6HWJ

Analysis of interatomic Contacts of Structural Units in PDB entry:
6HWJ