Analysis of interatomic Contacts of Structural Units in PDB entry:
6HWM

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6HWM entry

There are 7 chains in PDB entry 6HWM (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ILE 3	GLU 193
B	ILE 3	HIS 201
C	VAL 2	GLU 193
D	VAL 2	GLU 193
E	MET 1	HIS 201
F	VAL 2	GLU 196
G	VAL 2	GLU 193

There are 49 helices in PDB entry 6HWM. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	19	26	Right-handed alpha
Helix 2	AA2	A	36	54	Right-handed alpha
Helix 3	AA3	A	69	83	Right-handed alpha
Helix 4	AA4	A	97	105	Right-handed alpha
Helix 5	AA5	A	131	158	Right-handed alpha
Helix 6	AA6	A	160	168	Right-handed alpha
Helix 7	AA7	A	176	183	Right-handed alpha
Helix 8	AA8	B	19	26	Right-handed alpha
Helix 9	AA9	B	36	54	Right-handed alpha
Helix 10	AB1	B	69	83	Right-handed alpha
Helix 11	AB2	B	97	105	Right-handed alpha
Helix 12	AB3	B	131	158	Right-handed alpha
Helix 13	AB4	B	160	168	Right-handed alpha
Helix 14	AB5	B	176	183	Right-handed alpha
Helix 15	AB6	C	18	26	Right-handed alpha
Helix 16	AB7	C	36	54	Right-handed alpha
Helix 17	AB8	C	69	83	Right-handed alpha
Helix 18	AB9	C	97	105	Right-handed alpha
Helix 19	AC1	C	131	158	Right-handed alpha
Helix 20	AC2	C	160	168	Right-handed alpha
Helix 21	AC3	C	176	183	Right-handed alpha
Helix 22	AC4	D	18	26	Right-handed alpha
Helix 23	AC5	D	36	54	Right-handed alpha
Helix 24	AC6	D	69	83	Right-handed alpha
Helix 25	AC7	D	97	105	Right-handed alpha
Helix 26	AC8	D	131	158	Right-handed alpha
Helix 27	AC9	D	160	168	Right-handed alpha
Helix 28	AD1	D	176	183	Right-handed alpha
Helix 29	AD2	E	19	26	Right-handed alpha
Helix 30	AD3	E	36	54	Right-handed alpha
Helix 31	AD4	E	69	83	Right-handed alpha
Helix 32	AD5	E	97	105	Right-handed alpha
Helix 33	AD6	E	131	158	Right-handed alpha
Helix 34	AD7	E	160	168	Right-handed alpha
Helix 35	AD8	E	176	183	Right-handed alpha
Helix 36	AD9	F	19	26	Right-handed alpha
Helix 37	AE1	F	36	54	Right-handed alpha
Helix 38	AE2	F	69	83	Right-handed alpha
Helix 39	AE3	F	97	105	Right-handed alpha
Helix 40	AE4	F	131	158	Right-handed alpha
Helix 41	AE5	F	160	168	Right-handed alpha
Helix 42	AE6	F	176	183	Right-handed alpha
Helix 43	AE7	G	18	26	Right-handed alpha
Helix 44	AE8	G	36	54	Right-handed alpha
Helix 45	AE9	G	69	83	Right-handed alpha
Helix 46	AF1	G	97	105	Right-handed alpha
Helix 47	AF2	G	131	158	Right-handed alpha
Helix 48	AF3	G	160	168	Right-handed alpha
Helix 49	AF4	G	176	183	Right-handed alpha

There are 18 sheets in PDB entry 6HWM. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	5	6	first strand
Strand 2	A	17	18	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	28	31	first strand
Strand 2	A	59	65	parallel
Strand 3	A	87	96	parallel
Strand 4	A	118	121	parallel
Strand 5	A	172	175	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	28	31	first strand
Strand 2	A	59	65	parallel
Strand 3	A	87	96	parallel
Strand 4	A	111	113	parallel
Strand 5	A	187	188	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	5	6	first strand
Strand 2	B	17	18	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	28	31	first strand
Strand 2	B	59	65	parallel
Strand 3	B	87	96	parallel
Strand 4	B	118	121	parallel
Strand 5	B	172	175	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	28	31	first strand
Strand 2	B	59	65	parallel
Strand 3	B	87	96	parallel
Strand 4	B	112	113	parallel
Strand 5	B	187	188	parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	28	31	first strand
Strand 2	C	59	65	parallel
Strand 3	C	87	96	parallel
Strand 4	C	118	121	parallel
Strand 5	C	172	175	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	28	31	first strand
Strand 2	C	59	65	parallel
Strand 3	C	87	96	parallel
Strand 4	C	112	113	parallel
Strand 5	C	187	188	parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	28	31	first strand
Strand 2	D	59	65	parallel
Strand 3	D	87	96	parallel
Strand 4	D	118	121	parallel
Strand 5	D	172	175	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	28	31	first strand
Strand 2	D	59	65	parallel
Strand 3	D	87	96	parallel
Strand 4	D	111	113	parallel
Strand 5	D	187	188	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	5	6	first strand
Strand 2	E	17	18	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	28	31	first strand
Strand 2	E	59	65	parallel
Strand 3	E	87	96	parallel
Strand 4	E	118	121	parallel
Strand 5	E	172	175	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	28	31	first strand
Strand 2	E	59	65	parallel
Strand 3	E	87	96	parallel
Strand 4	E	112	113	parallel
Strand 5	E	187	188	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	5	6	first strand
Strand 2	F	17	18	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	28	31	first strand
Strand 2	F	59	65	parallel
Strand 3	F	87	96	parallel
Strand 4	F	118	121	parallel
Strand 5	F	172	175	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	28	31	first strand
Strand 2	F	59	65	parallel
Strand 3	F	87	96	parallel
Strand 4	F	112	113	parallel
Strand 5	F	187	188	parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	28	31	first strand
Strand 2	G	59	65	parallel
Strand 3	G	87	96	parallel
Strand 4	G	118	121	parallel
Strand 5	G	172	175	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	28	31	first strand
Strand 2	G	59	65	parallel
Strand 3	G	87	96	parallel
Strand 4	G	112	113	parallel
Strand 5	G	187	188	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6HWM

Analysis of interatomic Contacts of Structural Units in PDB entry:
6HWM