Analysis of interatomic Contacts of Structural Units in PDB entry:
6HXB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6HXB entry

There is 1 chain in PDB entry 6HXB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLU 2ALA 994
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 6HXB. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
8 17Right-handed alpha
Helix 2
AA2
A
25 34Right-handed alpha
Helix 3
AA3
A
51 55Right-handed alpha
Helix 4
AA4
A
59 78Right-handed alpha
Helix 5
AA5
A
88 123Right-handed alpha
Helix 6
AA6
A
143 145Right-handed 310
Helix 7
AA7
A
200 204Right-handed 310
Helix 8
AA8
A
226 229Right-handed 310
Helix 9
AA9
A
230 237Right-handed alpha
Helix 10
AB1
A
248 275Right-handed alpha
Helix 11
AB2
A
276 279Right-handed 310
Helix 12
AB3
A
287 307Right-handed alpha
Helix 13
AB4
A
310 329Right-handed alpha
Helix 14
AB5
A
337 342Right-handed alpha
Helix 15
AB6
A
407 420Right-handed alpha
Helix 16
AB7
A
439 453Right-handed alpha
Helix 17
AB8
A
463 468Right-handed alpha
Helix 18
AB9
A
469 478Right-handed alpha
Helix 19
AC1
A
516 521Right-handed alpha
Helix 20
AC2
A
537 554Right-handed alpha
Helix 21
AC3
A
580 588Right-handed 310
Helix 22
AC4
A
605 616Right-handed alpha
Helix 23
AC5
A
627 639Right-handed alpha
Helix 24
AC6
A
654 658Right-handed alpha
Helix 25
AC7
A
661 672Right-handed alpha
Helix 26
AC8
A
679 693Right-handed alpha
Helix 27
AC9
A
706 713Right-handed alpha
Helix 28
AD1
A
723 730Right-handed alpha
Helix 29
AD2
A
739 781Right-handed alpha
Helix 30
AD3
A
787 799Right-handed alpha
Helix 31
AD4
A
800 805Right-handed alpha
Helix 32
AD5
A
806 809Right-handed 310
Helix 33
AD6
A
829 857Right-handed alpha
Helix 34
AD7
A
866 870Right-handed 310
Helix 35
AD8
A
892 914Right-handed alpha
Helix 36
AD9
A
925 928Right-handed 310
Helix 37
AE1
A
929 949Right-handed alpha
Helix 38
AE2
A
951 955Right-handed 310
Helix 39
AE3
A
963 974Right-handed alpha
Helix 40
AE4
A
974 990Right-handed alpha
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There are 7 sheets in PDB entry 6HXB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
138 141first strand
Strand 2
A
126 130anti-parallel
Strand 3
A
150 153anti-parallel
Strand 4
A
219 225anti-parallel
Strand 5
A
162 168anti-parallel
Strand 6
A
207 208anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
187 188first strand
Strand 2
A
174 176anti-parallel
Strand 3
A
213 216anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
331 333first strand
Strand 2
A
732 734anti-parallel
Strand 3
A
715 719parallel
Strand 4
A
698 701parallel
Strand 5
A
347 350parallel
Strand 6
A
619 623parallel
Strand 7
A
674 676parallel
Strand 8
A
651 653parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
395 396first strand
Strand 2
A
381 384anti-parallel
Strand 3
A
363 368anti-parallel
Strand 4
A
590 598anti-parallel
Strand 5
A
559 566anti-parallel
Strand 6
A
511 515anti-parallel
Strand 7
A
493 500anti-parallel
Strand 8
A
479 488anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
395 396first strand
Strand 2
A
381 384anti-parallel
Strand 3
A
363 368anti-parallel
Strand 4
A
590 598anti-parallel
Strand 5
A
524 529parallel
Strand 6
A
532 535anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
372 373first strand
Strand 2
A
376 377anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
427 428first strand
Strand 2
A
433 434anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il