Analysis of interatomic Contacts of Structural Units in PDB entry:
6HXJ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6HXJ entry

There are 4 chains in PDB entry 6HXJ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 2	SER 398
B	SER 2	LYS 607
C	ALA 2	SER 398
D	SER 2	ARG 56

There are154 helices in PDB entry 6HXJ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	5	16	Right-handed alpha
Helix 2	AA2	A	125	129	Right-handed 310
Helix 3	AA3	A	147	159	Right-handed alpha
Helix 4	AA4	A	162	182	Right-handed alpha
Helix 5	AA5	A	212	218	Right-handed 310
Helix 6	AA6	A	234	247	Right-handed alpha
Helix 7	AA7	A	267	281	Right-handed alpha
Helix 8	AA8	A	296	310	Right-handed alpha
Helix 9	AA9	A	327	345	Right-handed alpha
Helix 10	AB1	A	361	372	Right-handed alpha
Helix 11	AB2	A	387	389	Right-handed 310
Helix 12	AB3	A	390	398	Right-handed alpha
Helix 13	AB4	B	16	33	Right-handed alpha
Helix 14	AB5	B	45	48	Right-handed 310
Helix 15	AB6	B	68	76	Right-handed alpha
Helix 16	AB7	B	87	101	Right-handed alpha
Helix 17	AB8	B	115	130	Right-handed alpha
Helix 18	AB9	B	155	162	Right-handed alpha
Helix 19	AC1	B	176	191	Right-handed alpha
Helix 20	AC2	B	209	220	Right-handed alpha
Helix 21	AC3	B	235	247	Right-handed alpha
Helix 22	AC4	B	285	296	Right-handed alpha
Helix 23	AC5	B	303	305	Right-handed 310
Helix 24	AC6	B	306	321	Right-handed alpha
Helix 25	AC7	B	339	346	Right-handed alpha
Helix 26	AC8	B	374	380	Right-handed alpha
Helix 27	AC9	B	383	394	Right-handed alpha
Helix 28	AD1	B	398	413	Right-handed alpha
Helix 29	AD2	B	419	431	Right-handed alpha
Helix 30	AD3	B	434	444	Right-handed alpha
Helix 31	AD4	B	453	468	Right-handed alpha
Helix 32	AD5	B	471	483	Right-handed alpha
Helix 33	AD6	B	500	514	Right-handed alpha
Helix 34	AD7	B	518	535	Right-handed alpha
Helix 35	AD8	B	541	553	Right-handed alpha
Helix 36	AD9	B	556	560	Right-handed 310
Helix 37	AE1	B	561	582	Right-handed alpha
Helix 38	AE2	B	590	592	Right-handed 310
Helix 39	AE3	C	5	16	Right-handed alpha
Helix 40	AE4	C	125	130	Right-handed 310
Helix 41	AE5	C	131	135	Right-handed 310
Helix 42	AE6	C	147	158	Right-handed alpha
Helix 43	AE7	C	161	182	Right-handed alpha
Helix 44	AE8	C	212	218	Right-handed 310
Helix 45	AE9	C	234	246	Right-handed alpha
Helix 46	AF1	C	267	281	Right-handed alpha
Helix 47	AF2	C	296	309	Right-handed alpha
Helix 48	AF3	C	327	345	Right-handed alpha
Helix 49	AF4	C	361	371	Right-handed alpha
Helix 50	AF5	C	372	376	Right-handed 310
Helix 51	AF6	C	389	398	Right-handed alpha
Helix 52	AF7	D	16	33	Right-handed alpha
Helix 53	AF8	D	45	48	Right-handed 310
Helix 54	AF9	D	68	76	Right-handed alpha
Helix 55	AG1	D	87	101	Right-handed alpha
Helix 56	AG2	D	115	130	Right-handed alpha
Helix 57	AG3	D	155	162	Right-handed alpha
Helix 58	AG4	D	177	191	Right-handed alpha
Helix 59	AG5	D	209	220	Right-handed alpha
Helix 60	AG6	D	235	247	Right-handed alpha
Helix 61	AG7	D	285	296	Right-handed alpha
Helix 62	AG8	D	303	305	Right-handed 310
Helix 63	AG9	D	306	321	Right-handed alpha
Helix 64	AH1	D	339	346	Right-handed alpha
Helix 65	AH2	D	374	380	Right-handed alpha
Helix 66	AH3	D	383	394	Right-handed alpha
Helix 67	AH4	D	398	413	Right-handed alpha
Helix 68	AH5	D	419	431	Right-handed alpha
Helix 69	AH6	D	434	444	Right-handed alpha
Helix 70	AH7	D	453	468	Right-handed alpha
Helix 71	AH8	D	471	483	Right-handed alpha
Helix 72	AH9	D	500	514	Right-handed alpha
Helix 73	AI1	D	518	535	Right-handed alpha
Helix 74	AI2	D	541	553	Right-handed alpha
Helix 75	AI3	D	556	560	Right-handed 310
Helix 76	AI4	D	561	583	Right-handed alpha
Helix 77	AI5	D	590	592	Right-handed 310
Helix 78	AI6	E	5	16	Right-handed alpha
Helix 79	AI7	E	147	158	Right-handed alpha
Helix 80	AI8	E	163	182	Right-handed alpha
Helix 81	AI9	E	212	218	Right-handed 310
Helix 82	AJ1	E	234	247	Right-handed alpha
Helix 83	AJ2	E	267	281	Right-handed alpha
Helix 84	AJ3	E	296	309	Right-handed alpha
Helix 85	AJ4	E	327	345	Right-handed alpha
Helix 86	AJ5	E	361	371	Right-handed alpha
Helix 87	AJ6	E	372	374	Right-handed 310
Helix 88	AJ7	E	387	389	Right-handed 310
Helix 89	AJ8	E	390	398	Right-handed alpha
Helix 90	AJ9	F	16	33	Right-handed alpha
Helix 91	AK1	F	45	48	Right-handed 310
Helix 92	AK2	F	68	76	Right-handed alpha
Helix 93	AK3	F	87	101	Right-handed alpha
Helix 94	AK4	F	115	130	Right-handed alpha
Helix 95	AK5	F	155	162	Right-handed alpha
Helix 96	AK6	F	177	191	Right-handed alpha
Helix 97	AK7	F	209	220	Right-handed alpha
Helix 98	AK8	F	235	247	Right-handed alpha
Helix 99	AK9	F	285	296	Right-handed alpha
Helix 100	AL1	F	303	305	Right-handed 310
Helix 101	AL2	F	306	321	Right-handed alpha
Helix 102	AL3	F	339	346	Right-handed alpha
Helix 103	AL4	F	374	380	Right-handed alpha
Helix 104	AL5	F	383	394	Right-handed alpha
Helix 105	AL6	F	398	413	Right-handed alpha
Helix 106	AL7	F	419	431	Right-handed alpha
Helix 107	AL8	F	434	445	Right-handed alpha
Helix 108	AL9	F	453	468	Right-handed alpha
Helix 109	AM1	F	471	483	Right-handed alpha
Helix 110	AM2	F	500	514	Right-handed alpha
Helix 111	AM3	F	518	535	Right-handed alpha
Helix 112	AM4	F	541	553	Right-handed alpha
Helix 113	AM5	F	556	560	Right-handed 310
Helix 114	AM6	F	561	583	Right-handed alpha
Helix 115	AM7	F	590	592	Right-handed 310
Helix 116	AM8	G	5	16	Right-handed alpha
Helix 117	AM9	G	124	130	Right-handed 310
Helix 118	AN1	G	147	158	Right-handed alpha
Helix 119	AN2	G	162	182	Right-handed alpha
Helix 120	AN3	G	212	218	Right-handed 310
Helix 121	AN4	G	234	245	Right-handed alpha
Helix 122	AN5	G	267	282	Right-handed alpha
Helix 123	AN6	G	296	310	Right-handed alpha
Helix 124	AN7	G	327	345	Right-handed alpha
Helix 125	AN8	G	361	371	Right-handed alpha
Helix 126	AN9	G	372	374	Right-handed 310
Helix 127	AO1	G	387	389	Right-handed 310
Helix 128	AO2	G	390	398	Right-handed alpha
Helix 129	AO3	H	16	33	Right-handed alpha
Helix 130	AO4	H	45	48	Right-handed 310
Helix 131	AO5	H	68	76	Right-handed alpha
Helix 132	AO6	H	87	101	Right-handed alpha
Helix 133	AO7	H	115	130	Right-handed alpha
Helix 134	AO8	H	155	162	Right-handed alpha
Helix 135	AO9	H	177	191	Right-handed alpha
Helix 136	AP1	H	209	220	Right-handed alpha
Helix 137	AP2	H	236	247	Right-handed alpha
Helix 138	AP3	H	285	297	Right-handed alpha
Helix 139	AP4	H	303	305	Right-handed 310
Helix 140	AP5	H	306	321	Right-handed alpha
Helix 141	AP6	H	339	346	Right-handed alpha
Helix 142	AP7	H	374	380	Right-handed alpha
Helix 143	AP8	H	383	394	Right-handed alpha
Helix 144	AP9	H	398	413	Right-handed alpha
Helix 145	AQ1	H	419	431	Right-handed alpha
Helix 146	AQ2	H	434	444	Right-handed alpha
Helix 147	AQ3	H	453	468	Right-handed alpha
Helix 148	AQ4	H	471	483	Right-handed alpha
Helix 149	AQ5	H	500	514	Right-handed alpha
Helix 150	AQ6	H	518	535	Right-handed alpha
Helix 151	AQ7	H	541	553	Right-handed alpha
Helix 152	AQ8	H	556	560	Right-handed 310
Helix 153	AQ9	H	561	583	Right-handed alpha
Helix 154	AR1	H	590	592	Right-handed 310

There are 33 sheets in PDB entry 6HXJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3	4	first strand
Strand 2	A	206	210	anti-parallel
Strand 3	A	184	195	anti-parallel
Strand 4	A	104	112	anti-parallel
Strand 5	A	115	121	anti-parallel
Strand 6	A	136	141	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3	4	first strand
Strand 2	A	206	210	anti-parallel
Strand 3	A	184	195	anti-parallel
Strand 4	A	200	203	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	23	26	first strand
Strand 2	A	93	96	anti-parallel
Strand 3	A	50	51	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	250	255	first strand
Strand 2	A	287	292	anti-parallel
Strand 3	A	265	266	parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	261	263	first strand
Strand 2	A	315	318	parallel
Strand 3	A	352	356	parallel
Strand 4	A	378	382	parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	51	56	first strand
Strand 2	B	59	66	anti-parallel
Strand 3	B	39	43	parallel
Strand 4	B	11	15	parallel
Strand 5	B	81	85	parallel
Strand 6	B	106	109	parallel
Strand 7	B	132	134	parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	147	150	first strand
Strand 2	B	140	143	anti-parallel
Strand 3	B	194	199	anti-parallel
Strand 4	B	170	174	parallel
Strand 5	B	225	231	parallel
Strand 6	B	252	258	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	355	357	first strand
Strand 2	D	594	596	parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	360	361	first strand
Strand 2	B	368	369	anti-parallel
Strand 3	B	372	373	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	594	596	first strand
Strand 2	D	355	357	parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	3	4	first strand
Strand 2	C	206	210	anti-parallel
Strand 3	C	184	195	anti-parallel
Strand 4	C	103	112	anti-parallel
Strand 5	C	115	121	anti-parallel
Strand 6	C	136	141	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	3	4	first strand
Strand 2	C	206	210	anti-parallel
Strand 3	C	184	195	anti-parallel
Strand 4	C	200	203	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	250	255	first strand
Strand 2	C	287	292	anti-parallel
Strand 3	C	265	266	parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	261	263	first strand
Strand 2	C	315	318	parallel
Strand 3	C	352	356	parallel
Strand 4	C	378	382	parallel

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There are 7 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	51	56	first strand
Strand 2	D	59	66	anti-parallel
Strand 3	D	39	43	parallel
Strand 4	D	11	15	parallel
Strand 5	D	81	85	parallel
Strand 6	D	106	109	parallel
Strand 7	D	132	134	parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	147	150	first strand
Strand 2	D	140	143	anti-parallel
Strand 3	D	194	199	anti-parallel
Strand 4	D	170	174	parallel
Strand 5	D	225	231	parallel
Strand 6	D	252	258	parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	360	361	first strand
Strand 2	D	368	369	anti-parallel
Strand 3	D	372	373	anti-parallel

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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	3	4	first strand
Strand 2	E	206	210	anti-parallel
Strand 3	E	184	194	anti-parallel
Strand 4	E	105	112	anti-parallel
Strand 5	E	115	121	anti-parallel
Strand 6	E	136	141	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	3	4	first strand
Strand 2	E	206	210	anti-parallel
Strand 3	E	184	194	anti-parallel
Strand 4	E	201	203	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	250	255	first strand
Strand 2	E	287	292	anti-parallel
Strand 3	E	265	266	parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	261	263	first strand
Strand 2	E	315	318	parallel
Strand 3	E	352	356	parallel
Strand 4	E	378	382	parallel

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There are 7 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	51	56	first strand
Strand 2	F	59	66	anti-parallel
Strand 3	F	39	43	parallel
Strand 4	F	11	15	parallel
Strand 5	F	81	85	parallel
Strand 6	F	106	109	parallel
Strand 7	F	132	134	parallel

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There are 6 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	147	150	first strand
Strand 2	F	140	143	anti-parallel
Strand 3	F	194	199	anti-parallel
Strand 4	F	170	174	parallel
Strand 5	F	225	230	parallel
Strand 6	F	252	257	parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	355	357	first strand
Strand 2	H	594	596	parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	360	361	first strand
Strand 2	F	368	369	anti-parallel
Strand 3	F	372	373	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	594	596	first strand
Strand 2	H	355	357	parallel

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There are 6 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	3	4	first strand
Strand 2	G	206	210	anti-parallel
Strand 3	G	184	195	anti-parallel
Strand 4	G	103	112	anti-parallel
Strand 5	G	115	121	anti-parallel
Strand 6	G	136	141	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	3	4	first strand
Strand 2	G	206	210	anti-parallel
Strand 3	G	184	195	anti-parallel
Strand 4	G	200	203	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	250	255	first strand
Strand 2	G	287	292	anti-parallel
Strand 3	G	265	266	parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	261	263	first strand
Strand 2	G	315	318	parallel
Strand 3	G	352	356	parallel
Strand 4	G	378	382	parallel

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There are 7 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	51	56	first strand
Strand 2	H	59	66	anti-parallel
Strand 3	H	39	43	parallel
Strand 4	H	11	15	parallel
Strand 5	H	81	85	parallel
Strand 6	H	106	109	parallel
Strand 7	H	132	134	parallel

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There are 6 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	147	150	first strand
Strand 2	H	140	143	anti-parallel
Strand 3	H	194	199	anti-parallel
Strand 4	H	170	174	parallel
Strand 5	H	225	231	parallel
Strand 6	H	252	258	parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	360	361	first strand
Strand 2	H	368	369	anti-parallel
Strand 3	H	372	373	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6HXJ

Analysis of interatomic Contacts of Structural Units in PDB entry:
6HXJ