Analysis of interatomic Contacts of Structural Units in PDB entry:
6HXN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6HXN entry

There are 2 chains in PDB entry 6HXN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLU 352LYS 607
B
GLU 352LYS 607
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 26 helices in PDB entry 6HXN. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
374 380Right-handed alpha
Helix 2
AA2
A
383 394Right-handed alpha
Helix 3
AA3
A
398 413Right-handed alpha
Helix 4
AA4
A
419 431Right-handed alpha
Helix 5
AA5
A
434 444Right-handed alpha
Helix 6
AA6
A
452 468Right-handed alpha
Helix 7
AA7
A
471 483Right-handed alpha
Helix 8
AA8
A
500 514Right-handed alpha
Helix 9
AA9
A
518 535Right-handed alpha
Helix 10
AB1
A
541 553Right-handed alpha
Helix 11
AB2
A
556 560Right-handed 310
Helix 12
AB3
A
561 582Right-handed alpha
Helix 13
AB4
A
590 594Right-handed 310
Helix 14
AB5
B
374 380Right-handed alpha
Helix 15
AB6
B
383 394Right-handed alpha
Helix 16
AB7
B
398 413Right-handed alpha
Helix 17
AB8
B
419 431Right-handed alpha
Helix 18
AB9
B
434 444Right-handed alpha
Helix 19
AC1
B
452 468Right-handed alpha
Helix 20
AC2
B
471 483Right-handed alpha
Helix 21
AC3
B
500 514Right-handed alpha
Helix 22
AC4
B
518 535Right-handed alpha
Helix 23
AC5
B
541 553Right-handed alpha
Helix 24
AC6
B
556 560Right-handed 310
Helix 25
AC7
B
561 582Right-handed alpha
Helix 26
AC8
B
590 594Right-handed 310
Back to top of page

There are 2 sheets in PDB entry 6HXN. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
360 361first strand
Strand 2
A
368 369anti-parallel
Strand 3
A
372 373anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
360 361first strand
Strand 2
B
368 369anti-parallel
Strand 3
B
372 373anti-parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il