Analysis of interatomic Contacts of Structural Units in PDB entry:
6HXQ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6HXQ entry

There are 4 chains in PDB entry 6HXQ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 4	GLY 345
B	MET 1	THR 410
C	ARG 4	GLY 345
D	MET 1	TYR 206

There are 60 helices in PDB entry 6HXQ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	25	39	Right-handed alpha
Helix 2	AA2	A	64	72	Right-handed alpha
Helix 3	AA3	A	83	85	Right-handed 310
Helix 4	AA4	A	86	96	Right-handed alpha
Helix 5	AA5	A	110	125	Right-handed alpha
Helix 6	AA6	A	152	156	Right-handed 310
Helix 7	AA7	A	168	181	Right-handed alpha
Helix 8	AA8	A	201	208	Right-handed alpha
Helix 9	AA9	A	227	242	Right-handed alpha
Helix 10	AB1	A	257	262	Right-handed 310
Helix 11	AB2	A	279	295	Right-handed alpha
Helix 12	AB3	A	304	314	Right-handed alpha
Helix 13	AB4	A	323	327	Right-handed 310
Helix 14	AB5	B	4	12	Right-handed alpha
Helix 15	AB6	B	12	17	Right-handed alpha
Helix 16	AB7	B	30	41	Right-handed alpha
Helix 17	AB8	B	65	77	Right-handed alpha
Helix 18	AB9	B	80	84	Right-handed 310
Helix 19	AC1	B	130	132	Right-handed 310
Helix 20	AC2	B	146	157	Right-handed alpha
Helix 21	AC3	B	163	165	Right-handed 310
Helix 22	AC4	B	166	184	Right-handed alpha
Helix 23	AC5	B	221	226	Right-handed alpha
Helix 24	AC6	B	237	244	Right-handed alpha
Helix 25	AC7	B	272	285	Right-handed alpha
Helix 26	AC8	B	300	314	Right-handed alpha
Helix 27	AC9	B	331	336	Right-handed alpha
Helix 28	AD1	B	338	350	Right-handed alpha
Helix 29	AD2	B	367	383	Right-handed alpha
Helix 30	AD3	B	396	409	Right-handed alpha
Helix 31	AD4	C	25	39	Right-handed alpha
Helix 32	AD5	C	64	72	Right-handed alpha
Helix 33	AD6	C	83	85	Right-handed 310
Helix 34	AD7	C	86	96	Right-handed alpha
Helix 35	AD8	C	110	125	Right-handed alpha
Helix 36	AD9	C	152	156	Right-handed 310
Helix 37	AE1	C	169	182	Right-handed alpha
Helix 38	AE2	C	201	208	Right-handed alpha
Helix 39	AE3	C	227	242	Right-handed alpha
Helix 40	AE4	C	256	260	Right-handed 310
Helix 41	AE5	C	268	273	Right-handed alpha
Helix 42	AE6	C	279	295	Right-handed alpha
Helix 43	AE7	C	304	314	Right-handed alpha
Helix 44	AE8	C	323	327	Right-handed 310
Helix 45	AE9	D	4	12	Right-handed alpha
Helix 46	AF1	D	30	41	Right-handed alpha
Helix 47	AF2	D	65	77	Right-handed alpha
Helix 48	AF3	D	80	84	Right-handed 310
Helix 49	AF4	D	130	132	Right-handed 310
Helix 50	AF5	D	146	157	Right-handed alpha
Helix 51	AF6	D	163	165	Right-handed 310
Helix 52	AF7	D	166	184	Right-handed alpha
Helix 53	AF8	D	221	226	Right-handed alpha
Helix 54	AF9	D	237	245	Right-handed alpha
Helix 55	AG1	D	271	285	Right-handed alpha
Helix 56	AG2	D	300	312	Right-handed alpha
Helix 57	AG3	D	331	336	Right-handed alpha
Helix 58	AG4	D	338	350	Right-handed alpha
Helix 59	AG5	D	367	383	Right-handed alpha
Helix 60	AG6	D	396	409	Right-handed alpha

There are 14 sheets in PDB entry 6HXQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	55	56	first strand
Strand 2	A	59	62	anti-parallel
Strand 3	A	43	47	parallel
Strand 4	A	18	21	parallel
Strand 5	A	77	80	parallel
Strand 6	A	101	104	parallel
Strand 7	A	127	129	parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	143	146	first strand
Strand 2	A	135	138	anti-parallel
Strand 3	A	186	191	anti-parallel
Strand 4	A	159	166	parallel
Strand 5	A	217	222	parallel
Strand 6	A	249	253	parallel
Strand 7	A	297	299	parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	332	333	first strand
Strand 2	B	385	389	anti-parallel
Strand 3	B	358	364	parallel
Strand 4	B	319	326	parallel
Strand 5	B	265	269	parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2	3	first strand
Strand 2	B	211	214	anti-parallel
Strand 3	B	186	199	anti-parallel
Strand 4	B	96	108	anti-parallel
Strand 5	B	113	119	anti-parallel
Strand 6	B	134	138	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2	3	first strand
Strand 2	B	211	214	anti-parallel
Strand 3	B	186	199	anti-parallel
Strand 4	B	202	207	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	23	26	first strand
Strand 2	B	88	93	anti-parallel
Strand 3	B	43	48	anti-parallel
Strand 4	B	60	63	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	259	260	first strand
Strand 2	B	291	292	anti-parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	55	56	first strand
Strand 2	C	59	62	anti-parallel
Strand 3	C	43	47	parallel
Strand 4	C	18	21	parallel
Strand 5	C	77	80	parallel
Strand 6	C	101	104	parallel
Strand 7	C	127	129	parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	143	146	first strand
Strand 2	C	135	138	anti-parallel
Strand 3	C	186	191	anti-parallel
Strand 4	C	159	166	parallel
Strand 5	C	217	222	parallel
Strand 6	C	249	253	parallel
Strand 7	C	297	299	parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	332	333	first strand
Strand 2	D	385	389	anti-parallel
Strand 3	D	358	364	parallel
Strand 4	D	319	326	parallel
Strand 5	D	265	269	parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	2	3	first strand
Strand 2	D	211	214	anti-parallel
Strand 3	D	186	199	anti-parallel
Strand 4	D	96	108	anti-parallel
Strand 5	D	113	119	anti-parallel
Strand 6	D	134	138	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	2	3	first strand
Strand 2	D	211	214	anti-parallel
Strand 3	D	186	199	anti-parallel
Strand 4	D	202	207	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	23	26	first strand
Strand 2	D	89	93	anti-parallel
Strand 3	D	43	47	anti-parallel
Strand 4	D	60	63	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	259	260	first strand
Strand 2	D	291	292	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6HXQ

Analysis of interatomic Contacts of Structural Units in PDB entry:
6HXQ