Analysis of interatomic Contacts of Structural Units in PDB entry:
6HYE

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6HYE entry

There are 4 chains in PDB entry 6HYE (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 30	MET 296
C	PRO 30	MET 296
E	HIS 29	MET 296
G	HIS 29	MET 296

There are108 helices in PDB entry 6HYE. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	30	38	Right-handed alpha
Helix 2	AA2	A	39	42	Right-handed 310
Helix 3	AA3	A	51	61	Right-handed alpha
Helix 4	AA4	A	83	94	Right-handed alpha
Helix 5	AA5	A	106	117	Right-handed alpha
Helix 6	AA6	A	137	141	Right-handed 310
Helix 7	AA7	A	151	161	Right-handed alpha
Helix 8	AA8	A	178	197	Right-handed alpha
Helix 9	AA9	A	199	201	Right-handed 310
Helix 10	AB1	A	202	211	Right-handed alpha
Helix 11	AB2	A	213	224	Right-handed alpha
Helix 12	AB3	A	238	248	Right-handed alpha
Helix 13	AB4	A	264	278	Right-handed alpha
Helix 14	AB5	A	281	289	Right-handed alpha
Helix 15	AB6	C	31	39	Right-handed alpha
Helix 16	AB7	C	40	42	Right-handed 310
Helix 17	AB8	C	51	60	Right-handed alpha
Helix 18	AB9	C	83	93	Right-handed alpha
Helix 19	AC1	C	106	116	Right-handed alpha
Helix 20	AC2	C	137	141	Right-handed 310
Helix 21	AC3	C	151	162	Right-handed alpha
Helix 22	AC4	C	178	197	Right-handed alpha
Helix 23	AC5	C	198	201	Right-handed 310
Helix 24	AC6	C	202	210	Right-handed alpha
Helix 25	AC7	C	213	224	Right-handed alpha
Helix 26	AC8	C	238	248	Right-handed alpha
Helix 27	AC9	C	256	256	Right-handed 310
Helix 28	AD1	C	259	262	Right-handed 310
Helix 29	AD2	C	264	278	Right-handed alpha
Helix 30	AD3	C	281	290	Right-handed alpha
Helix 31	AD4	E	30	39	Right-handed alpha
Helix 32	AD5	E	51	61	Right-handed alpha
Helix 33	AD6	E	83	94	Right-handed alpha
Helix 34	AD7	E	106	116	Right-handed alpha
Helix 35	AD8	E	137	141	Right-handed 310
Helix 36	AD9	E	151	162	Right-handed alpha
Helix 37	AE1	E	178	198	Right-handed alpha
Helix 38	AE2	E	199	201	Right-handed 310
Helix 39	AE3	E	202	210	Right-handed alpha
Helix 40	AE4	E	213	223	Right-handed alpha
Helix 41	AE5	E	238	248	Right-handed alpha
Helix 42	AE6	E	264	278	Right-handed alpha
Helix 43	AE7	E	281	290	Right-handed alpha
Helix 44	AE8	G	30	39	Right-handed alpha
Helix 45	AE9	G	40	42	Right-handed 310
Helix 46	AF1	G	52	62	Right-handed alpha
Helix 47	AF2	G	83	94	Right-handed alpha
Helix 48	AF3	G	106	117	Right-handed alpha
Helix 49	AF4	G	137	141	Right-handed 310
Helix 50	AF5	G	151	162	Right-handed alpha
Helix 51	AF6	G	178	197	Right-handed alpha
Helix 52	AF7	G	199	201	Right-handed 310
Helix 53	AF8	G	202	211	Right-handed alpha
Helix 54	AF9	G	213	224	Right-handed alpha
Helix 55	AG1	G	238	249	Right-handed alpha
Helix 56	AG2	G	264	278	Right-handed alpha
Helix 57	AG3	G	281	289	Right-handed alpha
Helix 58	AG4	B	23	32	Right-handed alpha
Helix 59	AG5	B	43	52	Right-handed alpha
Helix 60	AG6	B	64	72	Right-handed alpha
Helix 61	AG7	B	79	88	Right-handed alpha
Helix 62	AG8	B	102	113	Right-handed alpha
Helix 63	AG9	B	147	158	Right-handed alpha
Helix 64	AH1	B	173	192	Right-handed alpha
Helix 65	AH2	B	194	196	Right-handed 310
Helix 66	AH3	B	197	206	Right-handed alpha
Helix 67	AH4	B	208	219	Right-handed alpha
Helix 68	AH5	B	233	244	Right-handed alpha
Helix 69	AH6	B	259	273	Right-handed alpha
Helix 70	AH7	B	276	284	Right-handed alpha
Helix 71	AH8	D	23	31	Right-handed alpha
Helix 72	AH9	D	32	34	Right-handed 310
Helix 73	AI1	D	43	53	Right-handed alpha
Helix 74	AI2	D	79	88	Right-handed alpha
Helix 75	AI3	D	102	111	Right-handed alpha
Helix 76	AI4	D	147	157	Right-handed alpha
Helix 77	AI5	D	173	192	Right-handed alpha
Helix 78	AI6	D	194	206	Right-handed alpha
Helix 79	AI7	D	208	219	Right-handed alpha
Helix 80	AI8	D	233	245	Right-handed alpha
Helix 81	AI9	D	259	273	Right-handed alpha
Helix 82	AJ1	D	276	284	Right-handed alpha
Helix 83	AJ2	F	22	32	Right-handed alpha
Helix 84	AJ3	F	43	52	Right-handed alpha
Helix 85	AJ4	F	79	89	Right-handed alpha
Helix 86	AJ5	F	102	112	Right-handed alpha
Helix 87	AJ6	F	133	137	Right-handed 310
Helix 88	AJ7	F	147	158	Right-handed alpha
Helix 89	AJ8	F	173	193	Right-handed alpha
Helix 90	AJ9	F	194	196	Right-handed 310
Helix 91	AK1	F	197	206	Right-handed alpha
Helix 92	AK2	F	208	219	Right-handed alpha
Helix 93	AK3	F	233	244	Right-handed alpha
Helix 94	AK4	F	259	273	Right-handed alpha
Helix 95	AK5	F	276	285	Right-handed alpha
Helix 96	AK6	H	22	31	Right-handed alpha
Helix 97	AK7	H	32	34	Right-handed 310
Helix 98	AK8	H	43	52	Right-handed alpha
Helix 99	AK9	H	79	88	Right-handed alpha
Helix 100	AL1	H	102	111	Right-handed alpha
Helix 101	AL2	H	147	157	Right-handed alpha
Helix 102	AL3	H	173	192	Right-handed alpha
Helix 103	AL4	H	194	196	Right-handed 310
Helix 104	AL5	H	197	206	Right-handed alpha
Helix 105	AL6	H	208	219	Right-handed alpha
Helix 106	AL7	H	233	244	Right-handed alpha
Helix 107	AL8	H	259	273	Right-handed alpha
Helix 108	AL9	H	276	283	Right-handed alpha

There are 8 sheets in PDB entry 6HYE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	229	231	first strand
Strand 2	A	163	168	parallel
Strand 3	A	145	149	parallel
Strand 4	A	120	123	parallel
Strand 5	A	98	102	parallel
Strand 6	A	66	68	parallel
Strand 7	A	44	49	parallel
Strand 8	A	252	255	parallel

Back to list of sheets
Back to top of page

There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	44	49	first strand
Strand 2	C	65	68	parallel
Strand 3	C	98	102	parallel
Strand 4	C	120	123	parallel
Strand 5	C	145	149	parallel
Strand 6	C	165	168	parallel
Strand 7	C	229	232	parallel
Strand 8	C	252	255	parallel
Strand 9	C	44	49	parallel

Back to list of sheets
Back to top of page

There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	45	49	first strand
Strand 2	E	65	68	parallel
Strand 3	E	98	102	parallel
Strand 4	E	120	123	parallel
Strand 5	E	145	149	parallel
Strand 6	E	163	168	parallel
Strand 7	E	229	232	parallel
Strand 8	E	252	255	parallel
Strand 9	E	45	49	parallel

Back to list of sheets
Back to top of page

There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	44	49	first strand
Strand 2	G	66	68	parallel
Strand 3	G	98	102	parallel
Strand 4	G	120	123	parallel
Strand 5	G	145	149	parallel
Strand 6	G	163	168	parallel
Strand 7	G	230	232	parallel
Strand 8	G	252	255	parallel
Strand 9	G	44	49	parallel

Back to list of sheets
Back to top of page

There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	224	226	first strand
Strand 2	B	161	164	parallel
Strand 3	B	141	145	parallel
Strand 4	B	116	120	parallel
Strand 5	B	94	99	parallel
Strand 6	B	57	60	parallel
Strand 7	B	36	41	parallel
Strand 8	B	247	250	parallel

Back to list of sheets
Back to top of page

There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	36	41	first strand
Strand 2	D	57	60	parallel
Strand 3	D	94	97	parallel
Strand 4	D	116	119	parallel
Strand 5	D	141	145	parallel
Strand 6	D	161	165	parallel
Strand 7	D	224	228	parallel
Strand 8	D	247	250	parallel
Strand 9	D	36	41	parallel

Back to list of sheets
Back to top of page

There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	36	41	first strand
Strand 2	F	57	60	parallel
Strand 3	F	94	99	parallel
Strand 4	F	116	120	parallel
Strand 5	F	141	145	parallel
Strand 6	F	162	165	parallel
Strand 7	F	225	228	parallel
Strand 8	F	247	250	parallel
Strand 9	F	36	41	parallel

Back to list of sheets
Back to top of page

There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	224	226	first strand
Strand 2	H	161	164	parallel
Strand 3	H	141	145	parallel
Strand 4	H	116	119	parallel
Strand 5	H	94	97	parallel
Strand 6	H	57	60	parallel
Strand 7	H	36	41	parallel
Strand 8	H	247	250	parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6HYE

Analysis of interatomic Contacts of Structural Units in PDB entry:
6HYE