Analysis of interatomic Contacts of Structural Units in PDB entry:
6HYG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6HYG entry

There is 1 chain in PDB entry 6HYG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 17SER 489
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 6HYG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
26 32Right-handed alpha
Helix 2
AA2
A
89 95Right-handed alpha
Helix 3
AA3
A
134 140Right-handed 310
Helix 4
AA4
A
194 199Right-handed alpha
Helix 5
AA5
A
212 214Right-handed 310
Helix 6
AA6
A
291 297Right-handed alpha
Helix 7
AA7
A
354 360Right-handed alpha
Helix 8
AA8
A
399 405Right-handed 310
Helix 9
AA9
A
459 465Right-handed alpha
Helix 10
AB1
A
477 479Right-handed 310
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There are 12 sheets in PDB entry 6HYG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
19 23first strand
Strand 2
A
38 46anti-parallel
Strand 3
A
80 87anti-parallel
Strand 4
A
68 69anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
19 23first strand
Strand 2
A
38 46anti-parallel
Strand 3
A
80 87anti-parallel
Strand 4
A
73 74anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
62 64first strand
Strand 2
A
54 59anti-parallel
Strand 3
A
99 104anti-parallel
Strand 4
A
112 116anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
127 131first strand
Strand 2
A
142 152anti-parallel
Strand 3
A
184 193anti-parallel
Strand 4
A
171 173anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
127 131first strand
Strand 2
A
142 152anti-parallel
Strand 3
A
184 193anti-parallel
Strand 4
A
177 178anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
166 168first strand
Strand 2
A
158 163anti-parallel
Strand 3
A
203 208anti-parallel
Strand 4
A
216 221anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
284 288first strand
Strand 2
A
303 311anti-parallel
Strand 3
A
345 352anti-parallel
Strand 4
A
333 334anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
284 288first strand
Strand 2
A
303 311anti-parallel
Strand 3
A
345 352anti-parallel
Strand 4
A
338 339anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
327 329first strand
Strand 2
A
319 324anti-parallel
Strand 3
A
364 369anti-parallel
Strand 4
A
377 381anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
392 396first strand
Strand 2
A
407 417anti-parallel
Strand 3
A
449 458anti-parallel
Strand 4
A
436 438anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
392 396first strand
Strand 2
A
407 417anti-parallel
Strand 3
A
449 458anti-parallel
Strand 4
A
442 443anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
431 433first strand
Strand 2
A
423 428anti-parallel
Strand 3
A
468 473anti-parallel
Strand 4
A
481 486anti-parallel
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