Analysis of interatomic Contacts of Structural Units in PDB entry:
6HYH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6HYH entry

There are 2 chains in PDB entry 6HYH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 17HIS 320
B
 ALA 17HIS 320
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 6HYH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
29 47Right-handed alpha
Helix 2
AA2
A
58 72Right-handed alpha
Helix 3
AA3
A
87 98Right-handed alpha
Helix 4
AA4
A
123 139Right-handed alpha
Helix 5
AA5
A
140 142Right-handed 310
Helix 6
AA6
A
157 172Right-handed alpha
Helix 7
AA7
A
188 203Right-handed alpha
Helix 8
AA8
A
213 228Right-handed alpha
Helix 9
AA9
A
243 252Right-handed alpha
Helix 10
AB1
A
265 278Right-handed alpha
Helix 11
AB2
A
294 302Right-handed alpha
Helix 12
AB3
A
304 315Right-handed alpha
Helix 13
AB4
B
29 47Right-handed alpha
Helix 14
AB5
B
58 71Right-handed alpha
Helix 15
AB6
B
87 98Right-handed alpha
Helix 16
AB7
B
123 139Right-handed alpha
Helix 17
AB8
B
157 172Right-handed alpha
Helix 18
AB9
B
188 203Right-handed alpha
Helix 19
AC1
B
213 228Right-handed alpha
Helix 20
AC2
B
243 252Right-handed alpha
Helix 21
AC3
B
265 278Right-handed alpha
Helix 22
AC4
B
294 302Right-handed alpha
Helix 23
AC5
B
304 315Right-handed alpha
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There are 4 sheets in PDB entry 6HYH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 54first strand
Strand 2
A
19 24parallel
Strand 3
A
76 79parallel
Strand 4
A
101 104parallel
Strand 5
A
118 122parallel
Strand 6
A
285 288parallel
Strand 7
A
317 319anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
177 184first strand
Strand 2
A
146 152parallel
Strand 3
A
208 211parallel
Strand 4
A
236 241parallel
Strand 5
A
257 260parallel
Strand 6
A
292 293anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
49 54first strand
Strand 2
B
19 24parallel
Strand 3
B
76 79parallel
Strand 4
B
101 104parallel
Strand 5
B
118 121parallel
Strand 6
B
285 287parallel
Strand 7
B
317 319anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
177 184first strand
Strand 2
B
146 152parallel
Strand 3
B
208 211parallel
Strand 4
B
236 241parallel
Strand 5
B
257 260parallel
Strand 6
B
292 293anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il