Analysis of interatomic Contacts of Structural Units in PDB entry:
6HYP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6HYP entry

There is 1 chain in PDB entry 6HYP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 UNK 10THR 2963
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are100 helices in PDB entry 6HYP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
20 30Right-handed alpha
Helix 2
AA2
A
73 82Right-handed alpha
Helix 3
AA3
A
86 97Right-handed alpha
Helix 4
AA4
A
115 120Right-handed 310
Helix 5
AA5
A
123 139Right-handed alpha
Helix 6
AA6
A
144 152Right-handed alpha
Helix 7
AA7
A
154 162Right-handed alpha
Helix 8
AA8
A
167 170Right-handed 310
Helix 9
AA9
A
171 177Right-handed alpha
Helix 10
AB1
A
183 190Right-handed alpha
Helix 11
AB2
A
208 219Right-handed alpha
Helix 12
AB3
A
238 250Right-handed alpha
Helix 13
AB4
A
277 281Right-handed 310
Helix 14
AB5
A
293 305Right-handed alpha
Helix 15
AB6
A
320 332Right-handed alpha
Helix 16
AB7
A
370 379Right-handed alpha
Helix 17
AB8
A
393 402Right-handed alpha
Helix 18
AB9
A
403 407Right-handed 310
Helix 19
AC1
A
464 472Right-handed alpha
Helix 20
AC2
A
480 492Right-handed alpha
Helix 21
AC3
A
493 498Right-handed alpha
Helix 22
AC4
A
512 521Right-handed alpha
Helix 23
AC5
A
522 527Right-handed alpha
Helix 24
AC6
A
540 548Right-handed alpha
Helix 25
AC7
A
567 571Right-handed 310
Helix 26
AC8
A
631 645Right-handed alpha
Helix 27
AC9
A
659 666Right-handed alpha
Helix 28
AD1
A
700 710Right-handed alpha
Helix 29
AD2
A
717 729Right-handed alpha
Helix 30
AD3
A
736 749Right-handed alpha
Helix 31
AD4
A
783 796Right-handed alpha
Helix 32
AD5
A
814 822Right-handed alpha
Helix 33
AD6
A
837 844Right-handed alpha
Helix 34
AD7
A
886 894Right-handed alpha
Helix 35
AD8
A
910 915Right-handed alpha
Helix 36
AD9
A
929 938Right-handed alpha
Helix 37
AE1
A
955 964Right-handed alpha
Helix 38
AE2
A
965 968Right-handed 310
Helix 39
AE3
A
974 979Right-handed alpha
Helix 40
AE4
A
997 1004Right-handed alpha
Helix 41
AE5
A
1058 1072Right-handed alpha
Helix 42
AE6
A
1088 1100Right-handed alpha
Helix 43
AE7
A
1135 1141Right-handed alpha
Helix 44
AE8
A
1224 1233Right-handed alpha
Helix 45
AE9
A
1236 1241Right-handed alpha
Helix 46
AF1
A
1242 1246Right-handed 310
Helix 47
AF2
A
1261 1277Right-handed alpha
Helix 48
AF3
A
1284 1297Right-handed alpha
Helix 49
AF4
A
1305 1318Right-handed alpha
Helix 50
AF5
A
1343 1359Right-handed alpha
Helix 51
AF6
A
1373 1385Right-handed alpha
Helix 52
AF7
A
1400 1405Right-handed alpha
Helix 53
AF8
A
1477 1485Right-handed alpha
Helix 54
AF9
A
1498 1505Right-handed alpha
Helix 55
AG1
A
1546 1550Right-handed 310
Helix 56
AG2
A
1571 1578Right-handed alpha
Helix 57
AG3
A
1584 1600Right-handed alpha
Helix 58
AG4
A
1607 1622Right-handed alpha
Helix 59
AG5
A
1630 1635Right-handed alpha
Helix 60
AG6
A
1636 1641Right-handed alpha
Helix 61
AG7
A
1642 1646Right-handed 310
Helix 62
AG8
A
1652 1668Right-handed alpha
Helix 63
AG9
A
1724 1735Right-handed alpha
Helix 64
AH1
A
1736 1738Right-handed 310
Helix 65
AH2
A
1752 1764Right-handed alpha
Helix 66
AH3
A
1824 1831Right-handed alpha
Helix 67
AH4
A
1872 1877Right-handed alpha
Helix 68
AH5
A
1888 1896Right-handed alpha
Helix 69
AH6
A
1906 1925Right-handed alpha
Helix 70
AH7
A
1938 1950Right-handed alpha
Helix 71
AH8
A
1961 1966Right-handed 310
Helix 72
AH9
A
1975 1978Right-handed 310
Helix 73
AI1
A
1979 1989Right-handed alpha
Helix 74
AI2
A
2033 2046Right-handed alpha
Helix 75
AI3
A
2061 2071Right-handed alpha
Helix 76
AI4
A
2084 2089Right-handed alpha
Helix 77
AI5
A
2098 2120Right-handed alpha
Helix 78
AI6
A
2126 2143Right-handed alpha
Helix 79
AI7
A
2149 2160Right-handed alpha
Helix 80
AI8
A
2166 2184Right-handed alpha
Helix 81
AI9
A
2185 2187Right-handed 310
Helix 82
AJ1
A
2197 2206Right-handed alpha
Helix 83
AJ2
A
2221 2227Right-handed 310
Helix 84
AJ3
A
2270 2274Right-handed 310
Helix 85
AJ4
A
2284 2289Right-handed alpha
Helix 86
AJ5
A
2337 2352Right-handed alpha
Helix 87
AJ6
A
2370 2383Right-handed alpha
Helix 88
AJ7
A
2389 2403Right-handed alpha
Helix 89
AJ8
A
2407 2415Right-handed alpha
Helix 90
AJ9
A
2415 2426Right-handed alpha
Helix 91
AK1
A
2445 2451Right-handed alpha
Helix 92
AK2
A
2460 2488Right-handed alpha
Helix 93
AK3
A
2495 2504Right-handed alpha
Helix 94
AK4
A
2518 2532Right-handed alpha
Helix 95
AK5
A
2544 2551Right-handed alpha
Helix 96
AK6
A
2551 2561Right-handed alpha
Helix 97
AK7
A
2567 2579Right-handed alpha
Helix 98
AK8
A
2583 2587Right-handed 310
Helix 99
AK9
A
2919 2950Right-handed alpha
Helix 100
AL1
A
2957 2961Right-handed 310
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There are 11 sheets in PDB entry 6HYP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
338 339first strand
Strand 2
A
381 385parallel
Strand 3
A
423 427parallel
Strand 4
A
311 314parallel
Strand 5
A
456 457parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
355 357first strand
Strand 2
A
366 368anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
673 677first strand
Strand 2
A
825 829parallel
Strand 3
A
873 877parallel
Strand 4
A
649 653parallel
Strand 5
A
896 898parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
688 689first strand
Strand 2
A
811 812anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1106 1108first strand
Strand 2
A
1147 1149parallel
Strand 3
A
1191 1194parallel
Strand 4
A
1080 1082parallel
Strand 5
A
1216 1218parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1173 1175first strand
Strand 2
A
1180 1182anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1488 1492first strand
Strand 2
A
1534 1538parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1769 1770first strand
Strand 2
A
1811 1814parallel
Strand 3
A
1854 1859parallel
Strand 4
A
1745 1746parallel
Strand 5
A
1882 1883parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2006 2008first strand
Strand 2
A
2011 2013anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2075 2079first strand
Strand 2
A
2208 2212parallel
Strand 3
A
2258 2262parallel
Strand 4
A
2050 2053parallel
Strand 5
A
2278 2281parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2090 2094first strand
Strand 2
A
2193 2196anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il