Analysis of interatomic Contacts of Structural Units in PDB entry:
6HYS

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6HYS entry

There are 3 chains in PDB entry 6HYS (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 555	PRO 1186
B	GLN 555	THR 1187
C	MET 556	GLY 606

There are114 helices in PDB entry 6HYS. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	557	564	Right-handed alpha
Helix 2	AA2	A	565	569	Right-handed 310
Helix 3	AA3	A	570	581	Right-handed alpha
Helix 4	AA4	A	593	605	Right-handed alpha
Helix 5	AA5	A	606	610	Right-handed 310
Helix 6	AA6	A	619	635	Right-handed alpha
Helix 7	AA7	A	663	673	Right-handed alpha
Helix 8	AA8	A	686	690	Right-handed 310
Helix 9	AA9	A	691	708	Right-handed alpha
Helix 10	AB1	A	721	729	Right-handed alpha
Helix 11	AB2	A	755	771	Right-handed alpha
Helix 12	AB3	A	782	800	Right-handed alpha
Helix 13	AB4	A	817	824	Right-handed alpha
Helix 14	AB5	A	839	843	Right-handed 310
Helix 15	AB6	A	880	890	Right-handed alpha
Helix 16	AB7	A	904	910	Right-handed alpha
Helix 17	AB8	A	918	922	Right-handed 310
Helix 18	AB9	A	925	935	Right-handed alpha
Helix 19	AC1	A	950	964	Right-handed alpha
Helix 20	AC2	A	974	982	Right-handed alpha
Helix 21	AC3	A	986	999	Right-handed alpha
Helix 22	AC4	A	1001	1012	Right-handed alpha
Helix 23	AC5	A	1024	1034	Right-handed alpha
Helix 24	AC6	A	1040	1055	Right-handed alpha
Helix 25	AC7	A	1058	1066	Right-handed alpha
Helix 26	AC8	A	1068	1089	Right-handed alpha
Helix 27	AC9	A	1100	1112	Right-handed alpha
Helix 28	AD1	A	1170	1177	Right-handed alpha
Helix 29	AD2	B	557	564	Right-handed alpha
Helix 30	AD3	B	565	569	Right-handed 310
Helix 31	AD4	B	570	581	Right-handed alpha
Helix 32	AD5	B	593	605	Right-handed alpha
Helix 33	AD6	B	606	610	Right-handed 310
Helix 34	AD7	B	619	635	Right-handed alpha
Helix 35	AD8	B	663	673	Right-handed alpha
Helix 36	AD9	B	686	690	Right-handed 310
Helix 37	AE1	B	691	708	Right-handed alpha
Helix 38	AE2	B	721	729	Right-handed alpha
Helix 39	AE3	B	755	771	Right-handed alpha
Helix 40	AE4	B	782	800	Right-handed alpha
Helix 41	AE5	B	817	824	Right-handed alpha
Helix 42	AE6	B	839	843	Right-handed 310
Helix 43	AE7	B	880	890	Right-handed alpha
Helix 44	AE8	B	904	910	Right-handed alpha
Helix 45	AE9	B	918	922	Right-handed 310
Helix 46	AF1	B	925	935	Right-handed alpha
Helix 47	AF2	B	950	964	Right-handed alpha
Helix 48	AF3	B	974	982	Right-handed alpha
Helix 49	AF4	B	986	1000	Right-handed alpha
Helix 50	AF5	B	1001	1012	Right-handed alpha
Helix 51	AF6	B	1024	1034	Right-handed alpha
Helix 52	AF7	B	1040	1055	Right-handed alpha
Helix 53	AF8	B	1058	1066	Right-handed alpha
Helix 54	AF9	B	1068	1089	Right-handed alpha
Helix 55	AG1	B	1100	1112	Right-handed alpha
Helix 56	AG2	B	1170	1177	Right-handed alpha
Helix 57	AG3	C	557	564	Right-handed alpha
Helix 58	AG4	C	565	569	Right-handed 310
Helix 59	AG5	C	570	581	Right-handed alpha
Helix 60	AG6	C	593	605	Right-handed alpha
Helix 61	AG7	C	606	610	Right-handed 310
Helix 62	AG8	C	619	635	Right-handed alpha
Helix 63	AG9	C	663	673	Right-handed alpha
Helix 64	AH1	C	686	690	Right-handed 310
Helix 65	AH2	C	691	708	Right-handed alpha
Helix 66	AH3	C	721	729	Right-handed alpha
Helix 67	AH4	C	755	771	Right-handed alpha
Helix 68	AH5	C	782	800	Right-handed alpha
Helix 69	AH6	C	817	824	Right-handed alpha
Helix 70	AH7	C	839	843	Right-handed 310
Helix 71	AH8	C	880	890	Right-handed alpha
Helix 72	AH9	C	904	910	Right-handed alpha
Helix 73	AI1	C	918	922	Right-handed 310
Helix 74	AI2	C	925	935	Right-handed alpha
Helix 75	AI3	C	950	964	Right-handed alpha
Helix 76	AI4	C	974	982	Right-handed alpha
Helix 77	AI5	C	986	999	Right-handed alpha
Helix 78	AI6	C	1001	1012	Right-handed alpha
Helix 79	AI7	C	1024	1034	Right-handed alpha
Helix 80	AI8	C	1040	1055	Right-handed alpha
Helix 81	AI9	C	1058	1066	Right-handed alpha
Helix 82	AJ1	C	1068	1089	Right-handed alpha
Helix 83	AJ2	C	1100	1112	Right-handed alpha
Helix 84	AJ3	C	1170	1177	Right-handed alpha
Helix 85	AJ4	C	1178	1181	Right-handed 310
Helix 86	AJ5	D	557	564	Right-handed alpha
Helix 87	AJ6	D	565	569	Right-handed 310
Helix 88	AJ7	D	570	581	Right-handed alpha
Helix 89	AJ8	D	593	605	Right-handed alpha
Helix 90	AJ9	D	606	610	Right-handed 310
Helix 91	AK1	D	619	635	Right-handed alpha
Helix 92	AK2	D	663	673	Right-handed alpha
Helix 93	AK3	D	691	708	Right-handed alpha
Helix 94	AK4	D	721	729	Right-handed alpha
Helix 95	AK5	D	755	771	Right-handed alpha
Helix 96	AK6	D	782	800	Right-handed alpha
Helix 97	AK7	D	817	824	Right-handed alpha
Helix 98	AK8	D	839	843	Right-handed 310
Helix 99	AK9	D	880	889	Right-handed alpha
Helix 100	AL1	D	890	892	Right-handed 310
Helix 101	AL2	D	904	910	Right-handed alpha
Helix 102	AL3	D	918	922	Right-handed 310
Helix 103	AL4	D	925	935	Right-handed alpha
Helix 104	AL5	D	950	964	Right-handed alpha
Helix 105	AL6	D	974	982	Right-handed alpha
Helix 106	AL7	D	986	999	Right-handed alpha
Helix 107	AL8	D	1001	1012	Right-handed alpha
Helix 108	AL9	D	1024	1034	Right-handed alpha
Helix 109	AM1	D	1040	1055	Right-handed alpha
Helix 110	AM2	D	1058	1066	Right-handed alpha
Helix 111	AM3	D	1068	1089	Right-handed alpha
Helix 112	AM4	D	1100	1112	Right-handed alpha
Helix 113	AM5	D	1170	1177	Right-handed alpha
Helix 114	AM6	D	1178	1181	Right-handed 310

There are 16 sheets in PDB entry 6HYS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	649	651	first strand
Strand 2	A	642	646	anti-parallel
Strand 3	A	658	662	parallel
Strand 4	A	612	617	parallel
Strand 5	A	679	684	parallel
Strand 6	A	712	717	parallel
Strand 7	A	583	588	parallel
Strand 8	A	734	737	parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	744	747	first strand
Strand 2	A	897	901	parallel
Strand 3	A	851	856	parallel
Strand 4	A	775	779	parallel
Strand 5	A	833	838	parallel
Strand 6	A	807	811	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	859	866	first strand
Strand 2	A	871	878	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1115	1118	first strand
Strand 2	A	1124	1126	anti-parallel
Strand 3	A	1132	1135	anti-parallel
Strand 4	A	1160	1167	parallel
Strand 5	A	1148	1156	anti-parallel
Strand 6	A	1115	1118	anti-parallel

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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	649	651	first strand
Strand 2	B	642	646	anti-parallel
Strand 3	B	658	662	parallel
Strand 4	B	612	617	parallel
Strand 5	B	679	684	parallel
Strand 6	B	712	717	parallel
Strand 7	B	583	588	parallel
Strand 8	B	734	737	parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	744	747	first strand
Strand 2	B	897	901	parallel
Strand 3	B	851	856	parallel
Strand 4	B	775	779	parallel
Strand 5	B	833	838	parallel
Strand 6	B	807	811	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	859	866	first strand
Strand 2	B	871	878	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1115	1118	first strand
Strand 2	B	1124	1126	anti-parallel
Strand 3	B	1132	1135	anti-parallel
Strand 4	B	1160	1167	parallel
Strand 5	B	1148	1156	anti-parallel
Strand 6	B	1115	1118	anti-parallel

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There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	649	651	first strand
Strand 2	C	642	646	anti-parallel
Strand 3	C	658	662	parallel
Strand 4	C	612	617	parallel
Strand 5	C	679	684	parallel
Strand 6	C	712	717	parallel
Strand 7	C	583	588	parallel
Strand 8	C	734	737	parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	744	747	first strand
Strand 2	C	897	901	parallel
Strand 3	C	851	856	parallel
Strand 4	C	775	779	parallel
Strand 5	C	833	838	parallel
Strand 6	C	807	811	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	859	865	first strand
Strand 2	C	872	878	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1115	1118	first strand
Strand 2	C	1124	1126	anti-parallel
Strand 3	C	1132	1135	anti-parallel
Strand 4	C	1160	1167	parallel
Strand 5	C	1148	1156	anti-parallel
Strand 6	C	1115	1118	anti-parallel

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There are 8 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	649	651	first strand
Strand 2	D	642	646	anti-parallel
Strand 3	D	658	662	parallel
Strand 4	D	612	617	parallel
Strand 5	D	679	684	parallel
Strand 6	D	712	717	parallel
Strand 7	D	583	588	parallel
Strand 8	D	734	737	parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	744	747	first strand
Strand 2	D	897	901	parallel
Strand 3	D	851	856	parallel
Strand 4	D	775	779	parallel
Strand 5	D	833	838	parallel
Strand 6	D	807	811	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	859	866	first strand
Strand 2	D	871	878	anti-parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1115	1118	first strand
Strand 2	D	1124	1126	anti-parallel
Strand 3	D	1132	1135	anti-parallel
Strand 4	D	1160	1167	parallel
Strand 5	D	1148	1156	anti-parallel
Strand 6	D	1115	1118	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6HYS

Analysis of interatomic Contacts of Structural Units in PDB entry:
6HYS