Analysis of interatomic Contacts of Structural Units in PDB entry:
6HYU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6HYU entry

There are 4 chains in PDB entry 6HYU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 568PHE 1181
B
 A 1 A 6
C
 TYR 568THR 1187
D
 A 4 A 3
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 6HYU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
570 581Right-handed alpha
Helix 2
AA2
A
594 605Right-handed alpha
Helix 3
AA3
A
619 635Right-handed alpha
Helix 4
AA4
A
663 671Right-handed alpha
Helix 5
AA5
A
691 708Right-handed alpha
Helix 6
AA6
A
721 729Right-handed alpha
Helix 7
AA7
A
755 771Right-handed alpha
Helix 8
AA8
A
782 799Right-handed alpha
Helix 9
AA9
A
817 823Right-handed alpha
Helix 10
AB1
A
824 826Right-handed 310
Helix 11
AB2
A
840 844Right-handed 310
Helix 12
AB3
A
880 890Right-handed alpha
Helix 13
AB4
A
904 910Right-handed alpha
Helix 14
AB5
A
918 922Right-handed 310
Helix 15
AB6
A
925 935Right-handed alpha
Helix 16
AB7
A
950 965Right-handed alpha
Helix 17
AB8
A
974 981Right-handed alpha
Helix 18
AB9
A
986 999Right-handed alpha
Helix 19
AC1
A
1001 1014Right-handed alpha
Helix 20
AC2
A
1024 1034Right-handed alpha
Helix 21
AC3
A
1040 1055Right-handed alpha
Helix 22
AC4
A
1058 1066Right-handed alpha
Helix 23
AC5
A
1068 1089Right-handed alpha
Helix 24
AC6
A
1100 1111Right-handed alpha
Helix 25
AC7
A
1169 1173Right-handed 310
Helix 26
AC8
C
570 581Right-handed alpha
Helix 27
AC9
C
597 605Right-handed alpha
Helix 28
AD1
C
620 635Right-handed alpha
Helix 29
AD2
C
663 673Right-handed alpha
Helix 30
AD3
C
691 708Right-handed alpha
Helix 31
AD4
C
721 729Right-handed alpha
Helix 32
AD5
C
759 771Right-handed alpha
Helix 33
AD6
C
782 799Right-handed alpha
Helix 34
AD7
C
817 824Right-handed alpha
Helix 35
AD8
C
839 843Right-handed 310
Helix 36
AD9
C
887 889Right-handed 310
Helix 37
AE1
C
890 895Right-handed alpha
Helix 38
AE2
C
904 910Right-handed alpha
Helix 39
AE3
C
919 923Right-handed alpha
Helix 40
AE4
C
925 935Right-handed alpha
Helix 41
AE5
C
950 965Right-handed alpha
Helix 42
AE6
C
974 981Right-handed alpha
Helix 43
AE7
C
986 999Right-handed alpha
Helix 44
AE8
C
1001 1014Right-handed alpha
Helix 45
AE9
C
1024 1034Right-handed alpha
Helix 46
AF1
C
1040 1055Right-handed alpha
Helix 47
AF2
C
1058 1066Right-handed alpha
Helix 48
AF3
C
1068 1089Right-handed alpha
Helix 49
AF4
C
1100 1111Right-handed alpha
Helix 50
AF5
C
1139 1144Right-handed alpha
Helix 51
AF6
C
1169 1173Right-handed 310
Helix 52
AF7
C
1177 1181Right-handed 310
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There are 7 sheets in PDB entry 6HYU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
649 651first strand
Strand 2
A
642 646anti-parallel
Strand 3
A
658 662parallel
Strand 4
A
612 617parallel
Strand 5
A
679 685parallel
Strand 6
A
712 716parallel
Strand 7
A
583 587parallel
Strand 8
A
734 736parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
744 748first strand
Strand 2
A
897 901parallel
Strand 3
A
851 856parallel
Strand 4
A
775 779parallel
Strand 5
A
833 838parallel
Strand 6
A
807 812parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
862 865first strand
Strand 2
A
872 875anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1153 1156first strand
Strand 2
A
1160 1163anti-parallel
Strand 3
A
1132 1135parallel
Strand 4
A
1124 1126anti-parallel
Strand 5
A
1115 1118anti-parallel
Strand 6
A
1148 1150anti-parallel
Strand 7
A
1166 1167anti-parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
650 651first strand
Strand 2
C
642 645anti-parallel
Strand 3
C
658 662parallel
Strand 4
C
612 617parallel
Strand 5
C
679 684parallel
Strand 6
C
712 717parallel
Strand 7
C
583 587parallel
Strand 8
C
734 736parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
744 746first strand
Strand 2
C
897 901parallel
Strand 3
C
851 856parallel
Strand 4
C
775 779parallel
Strand 5
C
833 838parallel
Strand 6
C
807 811parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1124 1126first strand
Strand 2
C
1115 1118anti-parallel
Strand 3
C
1148 1156anti-parallel
Strand 4
C
1160 1167anti-parallel
Strand 5
C
1134 1135parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il