Analysis of interatomic Contacts of Structural Units in PDB entry:
6HZ4

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6HZ4 entry

There are 8 chains in PDB entry 6HZ4 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	TYR 168	GLY 457
B	TYR 168	GLY 457
C	TYR 168	GLY 457
D	LEU 174	GLY 457
E	ALA 173	GLY 457
F	ALA 173	GLY 457
M	GLN 3	LYS 348
N	ASN 193	LYS 348

There are109 helices in PDB entry 6HZ4. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	169	175	Right-handed alpha
Helix 2	AA2	A	180	195	Right-handed alpha
Helix 3	AA3	A	206	220	Right-handed alpha
Helix 4	AA4	A	237	242	Right-handed alpha
Helix 5	AA5	A	257	269	Right-handed alpha
Helix 6	AA6	A	281	284	Right-handed 310
Helix 7	AA7	A	285	290	Right-handed alpha
Helix 8	AA8	A	292	298	Right-handed alpha
Helix 9	AA9	A	303	307	Right-handed 310
Helix 10	AB1	A	337	341	Right-handed 310
Helix 11	AB2	A	343	350	Right-handed alpha
Helix 12	AB3	A	361	371	Right-handed alpha
Helix 13	AB4	A	374	395	Right-handed alpha
Helix 14	AB5	A	400	404	Right-handed 310
Helix 15	AB6	A	407	412	Right-handed alpha
Helix 16	AB7	A	421	432	Right-handed alpha
Helix 17	AB8	A	432	441	Right-handed alpha
Helix 18	AB9	A	444	457	Right-handed alpha
Helix 19	AC1	B	169	174	Right-handed alpha
Helix 20	AC2	B	180	195	Right-handed alpha
Helix 21	AC3	B	206	220	Right-handed alpha
Helix 22	AC4	B	237	242	Right-handed alpha
Helix 23	AC5	B	257	267	Right-handed alpha
Helix 24	AC6	B	285	291	Right-handed alpha
Helix 25	AC7	B	292	297	Right-handed alpha
Helix 26	AC8	B	303	307	Right-handed 310
Helix 27	AC9	B	343	348	Right-handed alpha
Helix 28	AD1	B	361	371	Right-handed alpha
Helix 29	AD2	B	374	395	Right-handed alpha
Helix 30	AD3	B	407	412	Right-handed alpha
Helix 31	AD4	B	421	432	Right-handed alpha
Helix 32	AD5	B	432	442	Right-handed alpha
Helix 33	AD6	B	444	457	Right-handed alpha
Helix 34	AD7	C	169	175	Right-handed alpha
Helix 35	AD8	C	180	195	Right-handed alpha
Helix 36	AD9	C	206	220	Right-handed alpha
Helix 37	AE1	C	237	242	Right-handed alpha
Helix 38	AE2	C	257	269	Right-handed alpha
Helix 39	AE3	C	285	291	Right-handed alpha
Helix 40	AE4	C	292	297	Right-handed alpha
Helix 41	AE5	C	303	307	Right-handed 310
Helix 42	AE6	C	343	350	Right-handed alpha
Helix 43	AE7	C	361	371	Right-handed alpha
Helix 44	AE8	C	374	395	Right-handed alpha
Helix 45	AE9	C	400	404	Right-handed 310
Helix 46	AF1	C	407	412	Right-handed alpha
Helix 47	AF2	C	421	432	Right-handed alpha
Helix 48	AF3	C	432	441	Right-handed alpha
Helix 49	AF4	C	444	457	Right-handed alpha
Helix 50	AF5	D	180	195	Right-handed alpha
Helix 51	AF6	D	206	220	Right-handed alpha
Helix 52	AF7	D	237	242	Right-handed alpha
Helix 53	AF8	D	257	269	Right-handed alpha
Helix 54	AF9	D	285	291	Right-handed alpha
Helix 55	AG1	D	292	297	Right-handed alpha
Helix 56	AG2	D	303	307	Right-handed 310
Helix 57	AG3	D	345	350	Right-handed alpha
Helix 58	AG4	D	361	370	Right-handed alpha
Helix 59	AG5	D	374	393	Right-handed alpha
Helix 60	AG6	D	407	412	Right-handed alpha
Helix 61	AG7	D	421	432	Right-handed alpha
Helix 62	AG8	D	432	441	Right-handed alpha
Helix 63	AG9	D	444	457	Right-handed alpha
Helix 64	AH1	E	180	195	Right-handed alpha
Helix 65	AH2	E	206	220	Right-handed alpha
Helix 66	AH3	E	237	242	Right-handed alpha
Helix 67	AH4	E	257	269	Right-handed alpha
Helix 68	AH5	E	285	291	Right-handed alpha
Helix 69	AH6	E	292	297	Right-handed alpha
Helix 70	AH7	E	303	307	Right-handed 310
Helix 71	AH8	E	343	350	Right-handed alpha
Helix 72	AH9	E	361	370	Right-handed alpha
Helix 73	AI1	E	374	395	Right-handed alpha
Helix 74	AI2	E	400	404	Right-handed 310
Helix 75	AI3	E	407	412	Right-handed alpha
Helix 76	AI4	E	421	432	Right-handed alpha
Helix 77	AI5	E	432	442	Right-handed alpha
Helix 78	AI6	E	444	457	Right-handed alpha
Helix 79	AI7	F	180	195	Right-handed alpha
Helix 80	AI8	F	206	220	Right-handed alpha
Helix 81	AI9	F	237	242	Right-handed alpha
Helix 82	AJ1	F	258	269	Right-handed alpha
Helix 83	AJ2	F	285	291	Right-handed alpha
Helix 84	AJ3	F	292	295	Right-handed 310
Helix 85	AJ4	F	303	307	Right-handed 310
Helix 86	AJ5	F	343	350	Right-handed alpha
Helix 87	AJ6	F	361	371	Right-handed alpha
Helix 88	AJ7	F	374	395	Right-handed alpha
Helix 89	AJ8	F	400	404	Right-handed 310
Helix 90	AJ9	F	407	412	Right-handed alpha
Helix 91	AK1	F	421	432	Right-handed alpha
Helix 92	AK2	F	432	441	Right-handed alpha
Helix 93	AK3	F	444	457	Right-handed alpha
Helix 94	AK4	M	7	19	Right-handed alpha
Helix 95	AK5	M	37	57	Right-handed alpha
Helix 96	AK6	M	77	84	Right-handed alpha
Helix 97	AK7	M	103	119	Right-handed alpha
Helix 98	AK8	M	123	137	Right-handed alpha
Helix 99	AK9	M	146	153	Right-handed alpha
Helix 100	AL1	M	154	156	Right-handed 310
Helix 101	AL2	M	161	175	Right-handed alpha
Helix 102	AL3	M	193	213	Right-handed alpha
Helix 103	AL4	M	262	266	Right-handed 310
Helix 104	AL5	M	277	289	Right-handed alpha
Helix 105	AL6	M	331	348	Right-handed alpha
Helix 106	AL7	N	194	213	Right-handed alpha
Helix 107	AL8	N	261	266	Right-handed alpha
Helix 108	AL9	N	278	289	Right-handed alpha
Helix 109	AM1	N	331	348	Right-handed alpha

There are 19 sheets in PDB entry 6HZ4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	227	231	first strand
Strand 2	A	274	279	parallel
Strand 3	A	326	332	parallel
Strand 4	A	196	200	parallel
Strand 5	A	351	354	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	243	247	first strand
Strand 2	A	252	256	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	227	231	first strand
Strand 2	B	274	279	parallel
Strand 3	B	326	333	parallel
Strand 4	B	196	201	parallel
Strand 5	B	351	354	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	243	247	first strand
Strand 2	B	252	256	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	308	309	first strand
Strand 2	B	319	320	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	227	231	first strand
Strand 2	C	275	279	parallel
Strand 3	C	327	333	parallel
Strand 4	C	196	201	parallel
Strand 5	C	351	354	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	243	247	first strand
Strand 2	C	252	256	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	228	231	first strand
Strand 2	D	275	279	parallel
Strand 3	D	327	333	parallel
Strand 4	D	196	201	parallel
Strand 5	D	351	354	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	245	247	first strand
Strand 2	D	252	254	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	228	231	first strand
Strand 2	E	274	279	parallel
Strand 3	E	326	332	parallel
Strand 4	E	196	200	parallel
Strand 5	E	351	354	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	243	247	first strand
Strand 2	E	252	256	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	227	231	first strand
Strand 2	F	275	279	parallel
Strand 3	F	327	331	parallel
Strand 4	F	196	199	parallel
Strand 5	F	351	353	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	243	247	first strand
Strand 2	F	252	256	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	308	309	first strand
Strand 2	F	319	320	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	61	69	first strand
Strand 2	M	92	100	anti-parallel
Strand 3	M	75	76	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	176	178	first strand
Strand 2	M	185	187	anti-parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	217	219	first strand
Strand 2	M	245	248	anti-parallel
Strand 3	M	253	258	anti-parallel
Strand 4	M	297	305	parallel
Strand 5	M	320	327	parallel
Strand 6	M	311	315	anti-parallel

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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	217	219	first strand
Strand 2	N	245	248	anti-parallel
Strand 3	N	253	256	anti-parallel
Strand 4	N	297	305	parallel
Strand 5	N	320	327	parallel
Strand 6	N	310	315	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	222	223	first strand
Strand 2	N	241	242	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6HZ4

Analysis of interatomic Contacts of Structural Units in PDB entry:
6HZ4