Analysis of interatomic Contacts of Structural Units in PDB entry:
6HZF

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6HZF entry

There are 2 chains in PDB entry 6HZF (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 23	TYR 893
B	VAL 24	LYS 409

There are 73 helices in PDB entry 6HZF. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	33	49	Right-handed alpha
Helix 2	AA2	A	101	119	Right-handed alpha
Helix 3	AA3	A	163	167	Right-handed 310
Helix 4	AA4	A	168	182	Right-handed alpha
Helix 5	AA5	A	194	198	Right-handed 310
Helix 6	AA6	A	204	208	Right-handed 310
Helix 7	AA7	A	211	231	Right-handed alpha
Helix 8	AA8	A	246	254	Right-handed alpha
Helix 9	AA9	A	265	283	Right-handed alpha
Helix 10	AB1	A	298	309	Right-handed alpha
Helix 11	AB2	A	309	322	Right-handed alpha
Helix 12	AB3	A	337	346	Right-handed alpha
Helix 13	AB4	A	369	381	Right-handed alpha
Helix 14	AB5	A	393	397	Right-handed 310
Helix 15	AB6	A	403	417	Right-handed alpha
Helix 16	AB7	A	430	434	Right-handed 310
Helix 17	AB8	A	441	445	Right-handed 310
Helix 18	AB9	A	448	453	Right-handed alpha
Helix 19	AC1	A	453	466	Right-handed alpha
Helix 20	AC2	A	470	487	Right-handed alpha
Helix 21	AC3	A	489	504	Right-handed alpha
Helix 22	AC4	A	505	515	Right-handed alpha
Helix 23	AC5	A	523	527	Right-handed 310
Helix 24	AC6	A	529	535	Right-handed alpha
Helix 25	AC7	A	536	540	Right-handed 310
Helix 26	AC8	A	544	549	Right-handed alpha
Helix 27	AC9	A	555	565	Right-handed alpha
Helix 28	AD1	A	573	596	Right-handed alpha
Helix 29	AD2	A	597	599	Right-handed 310
Helix 30	AD3	A	602	640	Right-handed alpha
Helix 31	AD4	A	642	667	Right-handed alpha
Helix 32	AD5	A	687	691	Right-handed 310
Helix 33	AD6	A	694	720	Right-handed alpha
Helix 34	AD7	A	765	768	Right-handed 310
Helix 35	AD8	A	776	784	Right-handed alpha
Helix 36	AD9	A	889	893	Right-handed 310
Helix 37	AE1	B	33	49	Right-handed alpha
Helix 38	AE2	B	101	119	Right-handed alpha
Helix 39	AE3	B	163	167	Right-handed 310
Helix 40	AE4	B	168	182	Right-handed alpha
Helix 41	AE5	B	193	198	Right-handed 310
Helix 42	AE6	B	204	208	Right-handed 310
Helix 43	AE7	B	211	231	Right-handed alpha
Helix 44	AE8	B	246	254	Right-handed alpha
Helix 45	AE9	B	265	283	Right-handed alpha
Helix 46	AF1	B	298	309	Right-handed alpha
Helix 47	AF2	B	309	322	Right-handed alpha
Helix 48	AF3	B	337	346	Right-handed alpha
Helix 49	AF4	B	369	381	Right-handed alpha
Helix 50	AF5	B	393	397	Right-handed 310
Helix 51	AF6	B	403	417	Right-handed alpha
Helix 52	AF7	B	430	434	Right-handed 310
Helix 53	AF8	B	441	445	Right-handed 310
Helix 54	AF9	B	448	453	Right-handed alpha
Helix 55	AG1	B	453	466	Right-handed alpha
Helix 56	AG2	B	470	487	Right-handed alpha
Helix 57	AG3	B	489	504	Right-handed alpha
Helix 58	AG4	B	505	515	Right-handed alpha
Helix 59	AG5	B	523	527	Right-handed 310
Helix 60	AG6	B	529	535	Right-handed alpha
Helix 61	AG7	B	536	540	Right-handed 310
Helix 62	AG8	B	544	549	Right-handed alpha
Helix 63	AG9	B	555	566	Right-handed alpha
Helix 64	AH1	B	573	594	Right-handed alpha
Helix 65	AH2	B	595	599	Right-handed 310
Helix 66	AH3	B	602	640	Right-handed alpha
Helix 67	AH4	B	642	667	Right-handed alpha
Helix 68	AH5	B	687	691	Right-handed 310
Helix 69	AH6	B	694	720	Right-handed alpha
Helix 70	AH7	B	765	768	Right-handed 310
Helix 71	AH8	B	776	784	Right-handed alpha
Helix 72	AH9	B	814	818	Right-handed 310
Helix 73	AI1	B	887	893	Right-handed 310

There are 12 sheets in PDB entry 6HZF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	54	57	first strand
Strand 2	A	24	30	parallel
Strand 3	A	69	74	parallel
Strand 4	A	94	99	parallel
Strand 5	A	86	91	anti-parallel
Strand 6	A	127	129	anti-parallel

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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	136	141	first strand
Strand 2	A	186	191	parallel
Strand 3	A	235	242	parallel
Strand 4	A	287	294	parallel
Strand 5	A	329	332	parallel
Strand 6	A	352	357	parallel
Strand 7	A	386	390	parallel
Strand 8	A	422	425	parallel
Strand 9	A	136	141	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	736	737	first strand
Strand 2	A	785	791	anti-parallel
Strand 3	A	853	859	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	742	745	first strand
Strand 2	A	771	774	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	760	763	first strand
Strand 2	A	831	837	anti-parallel
Strand 3	A	841	850	anti-parallel
Strand 4	A	795	802	anti-parallel
Strand 5	A	865	870	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	760	763	first strand
Strand 2	A	831	837	anti-parallel
Strand 3	A	877	878	parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	25	30	first strand
Strand 2	B	69	74	parallel
Strand 3	B	94	99	parallel
Strand 4	B	86	91	anti-parallel
Strand 5	B	127	129	anti-parallel

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There are 9 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	135	141	first strand
Strand 2	B	186	191	parallel
Strand 3	B	235	242	parallel
Strand 4	B	287	294	parallel
Strand 5	B	329	332	parallel
Strand 6	B	352	357	parallel
Strand 7	B	386	390	parallel
Strand 8	B	422	425	parallel
Strand 9	B	135	141	parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	736	737	first strand
Strand 2	B	785	791	anti-parallel
Strand 3	B	853	859	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	742	745	first strand
Strand 2	B	771	774	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	760	763	first strand
Strand 2	B	831	837	anti-parallel
Strand 3	B	841	850	anti-parallel
Strand 4	B	795	802	anti-parallel
Strand 5	B	865	870	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	760	763	first strand
Strand 2	B	831	837	anti-parallel
Strand 3	B	877	878	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6HZF

Analysis of interatomic Contacts of Structural Units in PDB entry:
6HZF