Analysis of interatomic Contacts of Structural Units in PDB entry:
6HZG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6HZG entry

There is 1 chain in PDB entry 6HZG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
PRO 22ASP 718
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 6HZG. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
33 50Right-handed alpha
Helix 2
AA2
A
79 83Right-handed 310
Helix 3
AA3
A
101 119Right-handed alpha
Helix 4
AA4
A
163 167Right-handed 310
Helix 5
AA5
A
168 182Right-handed alpha
Helix 6
AA6
A
194 198Right-handed 310
Helix 7
AA7
A
204 208Right-handed 310
Helix 8
AA8
A
211 231Right-handed alpha
Helix 9
AA9
A
246 254Right-handed alpha
Helix 10
AB1
A
265 283Right-handed alpha
Helix 11
AB2
A
298 309Right-handed alpha
Helix 12
AB3
A
309 322Right-handed alpha
Helix 13
AB4
A
337 346Right-handed alpha
Helix 14
AB5
A
369 381Right-handed alpha
Helix 15
AB6
A
393 397Right-handed 310
Helix 16
AB7
A
403 417Right-handed alpha
Helix 17
AB8
A
430 434Right-handed 310
Helix 18
AB9
A
448 453Right-handed alpha
Helix 19
AC1
A
453 466Right-handed alpha
Helix 20
AC2
A
470 487Right-handed alpha
Helix 21
AC3
A
489 504Right-handed alpha
Helix 22
AC4
A
505 515Right-handed alpha
Helix 23
AC5
A
523 527Right-handed 310
Helix 24
AC6
A
529 535Right-handed alpha
Helix 25
AC7
A
536 540Right-handed 310
Helix 26
AC8
A
544 549Right-handed alpha
Helix 27
AC9
A
555 566Right-handed alpha
Helix 28
AD1
A
573 594Right-handed alpha
Helix 29
AD2
A
595 599Right-handed 310
Helix 30
AD3
A
602 640Right-handed alpha
Helix 31
AD4
A
641 668Right-handed alpha
Helix 32
AD5
A
687 691Right-handed 310
Helix 33
AD6
A
694 718Right-handed alpha
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There are 2 sheets in PDB entry 6HZG. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
53 56first strand
Strand 2
A
23 29parallel
Strand 3
A
69 74parallel
Strand 4
A
94 99parallel
Strand 5
A
86 91anti-parallel
Strand 6
A
127 129anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
135 141first strand
Strand 2
A
186 191parallel
Strand 3
A
235 242parallel
Strand 4
A
287 294parallel
Strand 5
A
329 332parallel
Strand 6
A
352 357parallel
Strand 7
A
386 390parallel
Strand 8
A
422 425parallel
Strand 9
A
135 141parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il