Analysis of interatomic Contacts of Structural Units in PDB entry:
6HZH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6HZH entry

There are 2 chains in PDB entry 6HZH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 265	TRP 622
B	GLN 265	TRP 622

There are 30 helices in PDB entry 6HZH. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	271	290	Right-handed alpha
Helix 2	AA2	A	330	335	Right-handed alpha
Helix 3	AA3	A	339	342	Right-handed 310
Helix 4	AA4	A	343	354	Right-handed alpha
Helix 5	AA5	A	390	397	Right-handed alpha
Helix 6	AA6	A	398	407	Right-handed alpha
Helix 7	AA7	A	410	421	Right-handed alpha
Helix 8	AA8	A	441	445	Right-handed 310
Helix 9	AA9	A	446	453	Right-handed alpha
Helix 10	AB1	A	454	456	Right-handed 310
Helix 11	AB2	A	462	472	Right-handed alpha
Helix 12	AB3	A	473	475	Right-handed 310
Helix 13	AB4	A	508	520	Right-handed alpha
Helix 14	AB5	A	588	593	Right-handed alpha
Helix 15	AB6	A	593	608	Right-handed alpha
Helix 16	AB7	B	271	289	Right-handed alpha
Helix 17	AB8	B	330	335	Right-handed alpha
Helix 18	AB9	B	339	342	Right-handed 310
Helix 19	AC1	B	343	354	Right-handed alpha
Helix 20	AC2	B	390	397	Right-handed alpha
Helix 21	AC3	B	398	407	Right-handed alpha
Helix 22	AC4	B	410	421	Right-handed alpha
Helix 23	AC5	B	441	445	Right-handed 310
Helix 24	AC6	B	446	453	Right-handed alpha
Helix 25	AC7	B	462	472	Right-handed alpha
Helix 26	AC8	B	473	475	Right-handed 310
Helix 27	AC9	B	508	519	Right-handed alpha
Helix 28	AD1	B	520	524	Right-handed 310
Helix 29	AD2	B	588	593	Right-handed alpha
Helix 30	AD3	B	593	608	Right-handed alpha

There are 9 sheets in PDB entry 6HZH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	306	310	first strand
Strand 2	A	293	300	anti-parallel
Strand 3	A	574	582	anti-parallel
Strand 4	A	558	567	anti-parallel
Strand 5	A	541	549	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	362	365	first strand
Strand 2	A	386	389	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	368	370	first strand
Strand 2	A	376	378	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	478	479	first strand
Strand 2	A	504	505	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	306	310	first strand
Strand 2	B	293	300	anti-parallel
Strand 3	B	574	582	anti-parallel
Strand 4	B	558	567	anti-parallel
Strand 5	B	541	549	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	362	365	first strand
Strand 2	B	386	389	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	368	370	first strand
Strand 2	B	376	378	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	478	479	first strand
Strand 2	B	504	505	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	487	490	first strand
Strand 2	B	494	497	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6HZH

Analysis of interatomic Contacts of Structural Units in PDB entry:
6HZH