Analysis of interatomic Contacts of Structural Units in PDB entry:
6HZQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6HZQ entry

There is 1 chain in PDB entry 6HZQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 234ALA 567
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 6HZQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
237 255Right-handed alpha
Helix 2
AA2
A
305 308Right-handed 310
Helix 3
AA3
A
309 320Right-handed alpha
Helix 4
AA4
A
352 358Right-handed alpha
Helix 5
AA5
A
360 370Right-handed alpha
Helix 6
AA6
A
373 383Right-handed alpha
Helix 7
AA7
A
409 417Right-handed alpha
Helix 8
AA8
A
424 437Right-handed alpha
Helix 9
AA9
A
460 471Right-handed alpha
Helix 10
AB1
A
472 475Right-handed 310
Helix 11
AB2
A
481 485Right-handed 310
Helix 12
AB3
A
546 561Right-handed alpha
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There are 4 sheets in PDB entry 6HZQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
272 278first strand
Strand 2
A
259 266anti-parallel
Strand 3
A
526 533anti-parallel
Strand 4
A
507 519anti-parallel
Strand 5
A
492 496anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
272 278first strand
Strand 2
A
259 266anti-parallel
Strand 3
A
526 533anti-parallel
Strand 4
A
507 519anti-parallel
Strand 5
A
499 501anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
328 330first strand
Strand 2
A
349 351anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
440 441first strand
Strand 2
A
456 457anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il