Analysis of interatomic Contacts of Structural Units in PDB entry:
6I00

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6I00 entry

There are 12 chains in PDB entry 6I00 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
J	ILE 35	SER 347
I	ILE 35	SER 347
H	ILE 35	SER 347
G	ILE 35	SER 347
F	ILE 35	SER 347
E	ILE 35	SER 347
D	ILE 35	SER 347
C	ILE 35	SER 347
B	ILE 35	SER 347
A	ILE 35	SER 347
L	ILE 35	SER 347
K	ILE 35	SER 347

There are 83 helices in PDB entry 6I00. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	J	55	66	Right-handed alpha
Helix 2	AA2	J	96	108	Right-handed alpha
Helix 3	AA3	J	118	127	Right-handed alpha
Helix 4	AA4	J	202	210	Right-handed alpha
Helix 5	AA5	J	211	213	Right-handed 310
Helix 6	AA6	J	225	239	Right-handed alpha
Helix 7	AA7	I	55	60	Right-handed alpha
Helix 8	AA8	I	60	66	Right-handed alpha
Helix 9	AA9	I	96	108	Right-handed alpha
Helix 10	AB1	I	118	127	Right-handed alpha
Helix 11	AB2	I	202	210	Right-handed alpha
Helix 12	AB3	I	211	213	Right-handed 310
Helix 13	AB4	I	226	239	Right-handed alpha
Helix 14	AB5	I	313	317	Right-handed 310
Helix 15	AB6	H	55	66	Right-handed alpha
Helix 16	AB7	H	96	108	Right-handed alpha
Helix 17	AB8	H	118	127	Right-handed alpha
Helix 18	AB9	H	202	210	Right-handed alpha
Helix 19	AC1	H	211	213	Right-handed 310
Helix 20	AC2	H	225	239	Right-handed alpha
Helix 21	AC3	G	55	60	Right-handed alpha
Helix 22	AC4	G	60	66	Right-handed alpha
Helix 23	AC5	G	96	108	Right-handed alpha
Helix 24	AC6	G	115	127	Right-handed alpha
Helix 25	AC7	G	202	210	Right-handed alpha
Helix 26	AC8	G	211	213	Right-handed 310
Helix 27	AC9	G	226	239	Right-handed alpha
Helix 28	AD1	G	313	317	Right-handed 310
Helix 29	AD2	F	55	66	Right-handed alpha
Helix 30	AD3	F	96	108	Right-handed alpha
Helix 31	AD4	F	118	127	Right-handed alpha
Helix 32	AD5	F	202	210	Right-handed alpha
Helix 33	AD6	F	211	213	Right-handed 310
Helix 34	AD7	F	225	239	Right-handed alpha
Helix 35	AD8	E	55	60	Right-handed alpha
Helix 36	AD9	E	60	66	Right-handed alpha
Helix 37	AE1	E	96	108	Right-handed alpha
Helix 38	AE2	E	117	127	Right-handed alpha
Helix 39	AE3	E	202	210	Right-handed alpha
Helix 40	AE4	E	211	213	Right-handed 310
Helix 41	AE5	E	226	239	Right-handed alpha
Helix 42	AE6	D	55	66	Right-handed alpha
Helix 43	AE7	D	96	108	Right-handed alpha
Helix 44	AE8	D	118	127	Right-handed alpha
Helix 45	AE9	D	202	210	Right-handed alpha
Helix 46	AF1	D	211	213	Right-handed 310
Helix 47	AF2	D	225	239	Right-handed alpha
Helix 48	AF3	D	307	311	Right-handed 310
Helix 49	AF4	C	55	60	Right-handed alpha
Helix 50	AF5	C	60	66	Right-handed alpha
Helix 51	AF6	C	96	108	Right-handed alpha
Helix 52	AF7	C	115	127	Right-handed alpha
Helix 53	AF8	C	169	173	Right-handed 310
Helix 54	AF9	C	202	210	Right-handed alpha
Helix 55	AG1	C	211	213	Right-handed 310
Helix 56	AG2	C	226	239	Right-handed alpha
Helix 57	AG3	C	313	317	Right-handed 310
Helix 58	AG4	B	55	66	Right-handed alpha
Helix 59	AG5	B	96	108	Right-handed alpha
Helix 60	AG6	B	118	127	Right-handed alpha
Helix 61	AG7	B	202	210	Right-handed alpha
Helix 62	AG8	B	211	213	Right-handed 310
Helix 63	AG9	B	225	239	Right-handed alpha
Helix 64	AH1	A	55	60	Right-handed alpha
Helix 65	AH2	A	60	66	Right-handed alpha
Helix 66	AH3	A	96	108	Right-handed alpha
Helix 67	AH4	A	118	127	Right-handed alpha
Helix 68	AH5	A	202	211	Right-handed alpha
Helix 69	AH6	A	226	239	Right-handed alpha
Helix 70	AH7	A	313	317	Right-handed 310
Helix 71	AH8	L	55	66	Right-handed alpha
Helix 72	AH9	L	96	108	Right-handed alpha
Helix 73	AI1	L	118	127	Right-handed alpha
Helix 74	AI2	L	202	210	Right-handed alpha
Helix 75	AI3	L	211	213	Right-handed 310
Helix 76	AI4	L	225	239	Right-handed alpha
Helix 77	AI5	K	55	60	Right-handed alpha
Helix 78	AI6	K	60	66	Right-handed alpha
Helix 79	AI7	K	96	108	Right-handed alpha
Helix 80	AI8	K	118	127	Right-handed alpha
Helix 81	AI9	K	202	211	Right-handed alpha
Helix 82	AJ1	K	226	239	Right-handed alpha
Helix 83	AJ2	K	313	317	Right-handed 310

There are 32 sheets in PDB entry 6I00. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	157	160	first strand
Strand 2	J	144	151	anti-parallel
Strand 3	J	131	139	anti-parallel
Strand 4	J	71	73	parallel
Strand 5	J	36	40	parallel
Strand 6	J	302	306	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	186	187	first strand
Strand 2	J	190	194	anti-parallel
Strand 3	J	216	220	parallel
Strand 4	J	242	246	parallel
Strand 5	J	283	284	anti-parallel
Strand 6	J	290	292	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	342	346	first strand
Strand 2	J	330	336	parallel
Strand 3	I	330	335	anti-parallel
Strand 4	K	342	345	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	342	346	first strand
Strand 2	L	330	336	parallel
Strand 3	K	330	334	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	157	160	first strand
Strand 2	I	144	151	anti-parallel
Strand 3	I	131	139	anti-parallel
Strand 4	I	71	73	parallel
Strand 5	I	36	41	parallel
Strand 6	I	301	306	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	186	187	first strand
Strand 2	I	190	194	anti-parallel
Strand 3	I	216	220	parallel
Strand 4	I	242	246	parallel
Strand 5	I	283	284	anti-parallel
Strand 6	I	290	292	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	342	345	first strand
Strand 2	G	330	335	parallel
Strand 3	H	330	336	anti-parallel
Strand 4	F	342	346	parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	157	160	first strand
Strand 2	H	144	151	anti-parallel
Strand 3	H	131	139	anti-parallel
Strand 4	H	71	73	parallel
Strand 5	H	36	40	parallel
Strand 6	H	302	306	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	186	187	first strand
Strand 2	H	190	194	anti-parallel
Strand 3	H	216	220	parallel
Strand 4	H	242	246	parallel
Strand 5	H	283	284	anti-parallel
Strand 6	H	290	292	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	157	160	first strand
Strand 2	G	144	151	anti-parallel
Strand 3	G	131	139	anti-parallel
Strand 4	G	71	73	parallel
Strand 5	G	36	41	parallel
Strand 6	G	301	306	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	186	187	first strand
Strand 2	G	190	194	anti-parallel
Strand 3	G	216	220	parallel
Strand 4	G	242	246	parallel
Strand 5	G	283	284	anti-parallel
Strand 6	G	290	292	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	342	345	first strand
Strand 2	E	330	335	parallel
Strand 3	F	330	336	anti-parallel
Strand 4	D	342	346	parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	157	160	first strand
Strand 2	F	144	151	anti-parallel
Strand 3	F	131	139	anti-parallel
Strand 4	F	71	73	parallel
Strand 5	F	36	40	parallel
Strand 6	F	302	306	anti-parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	186	187	first strand
Strand 2	F	190	194	anti-parallel
Strand 3	F	216	220	parallel
Strand 4	F	242	246	parallel
Strand 5	F	283	284	anti-parallel
Strand 6	F	290	292	anti-parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	157	160	first strand
Strand 2	E	144	151	anti-parallel
Strand 3	E	131	139	anti-parallel
Strand 4	E	71	73	parallel
Strand 5	E	36	41	parallel
Strand 6	E	301	306	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	192	194	first strand
Strand 2	E	216	220	parallel
Strand 3	E	242	246	parallel
Strand 4	E	283	284	anti-parallel
Strand 5	E	290	292	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	342	345	first strand
Strand 2	C	330	335	parallel
Strand 3	D	330	336	anti-parallel
Strand 4	B	342	346	parallel

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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	157	160	first strand
Strand 2	D	144	151	anti-parallel
Strand 3	D	131	139	anti-parallel
Strand 4	D	71	73	parallel
Strand 5	D	36	40	parallel
Strand 6	D	302	306	anti-parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	186	187	first strand
Strand 2	D	190	194	anti-parallel
Strand 3	D	216	220	parallel
Strand 4	D	242	246	parallel
Strand 5	D	283	284	anti-parallel
Strand 6	D	290	292	anti-parallel

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There are 6 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	157	162	first strand
Strand 2	C	144	151	anti-parallel
Strand 3	C	131	139	anti-parallel
Strand 4	C	71	73	parallel
Strand 5	C	36	41	parallel
Strand 6	C	301	306	anti-parallel

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There are 6 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	186	187	first strand
Strand 2	C	190	194	anti-parallel
Strand 3	C	216	220	parallel
Strand 4	C	242	246	parallel
Strand 5	C	283	284	anti-parallel
Strand 6	C	290	292	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	342	345	first strand
Strand 2	A	330	335	parallel
Strand 3	B	330	334	anti-parallel

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There are 6 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	157	160	first strand
Strand 2	B	149	151	anti-parallel
Strand 3	B	131	134	anti-parallel
Strand 4	B	71	73	parallel
Strand 5	B	36	40	parallel
Strand 6	B	302	306	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	137	139	first strand
Strand 2	B	144	146	anti-parallel

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There are 6 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	186	187	first strand
Strand 2	B	190	194	anti-parallel
Strand 3	B	216	220	parallel
Strand 4	B	242	246	parallel
Strand 5	B	283	284	anti-parallel
Strand 6	B	290	292	anti-parallel

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There are 6 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	157	160	first strand
Strand 2	A	144	151	anti-parallel
Strand 3	A	131	139	anti-parallel
Strand 4	A	71	73	parallel
Strand 5	A	36	41	parallel
Strand 6	A	301	306	anti-parallel

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There are 6 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	186	187	first strand
Strand 2	A	190	194	anti-parallel
Strand 3	A	216	220	parallel
Strand 4	A	242	246	parallel
Strand 5	A	283	284	anti-parallel
Strand 6	A	290	292	anti-parallel

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There are 6 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	157	160	first strand
Strand 2	L	149	151	anti-parallel
Strand 3	L	131	134	anti-parallel
Strand 4	L	71	73	parallel
Strand 5	L	36	40	parallel
Strand 6	L	302	306	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	137	139	first strand
Strand 2	L	144	146	anti-parallel

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There are 6 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	186	187	first strand
Strand 2	L	190	194	anti-parallel
Strand 3	L	216	220	parallel
Strand 4	L	242	246	parallel
Strand 5	L	283	284	anti-parallel
Strand 6	L	290	292	anti-parallel

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There are 6 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	157	160	first strand
Strand 2	K	144	151	anti-parallel
Strand 3	K	131	139	anti-parallel
Strand 4	K	71	73	parallel
Strand 5	K	36	41	parallel
Strand 6	K	301	306	anti-parallel

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There are 6 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	186	187	first strand
Strand 2	K	190	194	anti-parallel
Strand 3	K	216	220	parallel
Strand 4	K	242	246	parallel
Strand 5	K	283	284	anti-parallel
Strand 6	K	290	292	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6I00

Analysis of interatomic Contacts of Structural Units in PDB entry:
6I00