Analysis of interatomic Contacts of Structural Units in PDB entry:
6I01

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6I01 entry

There are 2 chains in PDB entry 6I01 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 102	ASN 617
B	LEU 102	ASN 617

There are 30 helices in PDB entry 6I01. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	130	138	Right-handed alpha
Helix 2	AA2	A	176	180	Right-handed 310
Helix 3	AA3	A	210	228	Right-handed alpha
Helix 4	AA4	A	354	363	Right-handed alpha
Helix 5	AA5	A	400	416	Right-handed alpha
Helix 6	AA6	A	443	462	Right-handed alpha
Helix 7	AA7	A	463	473	Right-handed alpha
Helix 8	AA8	A	474	479	Right-handed 310
Helix 9	AA9	A	480	484	Right-handed 310
Helix 10	AB1	A	508	531	Right-handed alpha
Helix 11	AB2	A	531	549	Right-handed alpha
Helix 12	AB3	A	550	553	Right-handed 310
Helix 13	AB4	A	562	568	Right-handed alpha
Helix 14	AB5	A	575	590	Right-handed alpha
Helix 15	AB6	A	595	609	Right-handed alpha
Helix 16	AB7	B	130	138	Right-handed alpha
Helix 17	AB8	B	176	180	Right-handed 310
Helix 18	AB9	B	210	228	Right-handed alpha
Helix 19	AC1	B	354	363	Right-handed alpha
Helix 20	AC2	B	400	416	Right-handed alpha
Helix 21	AC3	B	443	462	Right-handed alpha
Helix 22	AC4	B	463	473	Right-handed alpha
Helix 23	AC5	B	474	479	Right-handed 310
Helix 24	AC6	B	480	484	Right-handed 310
Helix 25	AC7	B	508	526	Right-handed alpha
Helix 26	AC8	B	531	549	Right-handed alpha
Helix 27	AC9	B	550	553	Right-handed 310
Helix 28	AD1	B	562	568	Right-handed alpha
Helix 29	AD2	B	575	590	Right-handed alpha
Helix 30	AD3	B	595	609	Right-handed alpha

There are 14 sheets in PDB entry 6I01. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	105	111	first strand
Strand 2	A	115	122	anti-parallel
Strand 3	A	125	127	anti-parallel

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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	140	146	first strand
Strand 2	A	149	155	anti-parallel

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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	256	263	first strand
Strand 2	A	268	275	anti-parallel
Strand 3	A	387	392	anti-parallel
Strand 4	A	293	300	anti-parallel
Strand 5	A	348	353	anti-parallel

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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	282	285	first strand
Strand 2	A	379	387	anti-parallel
Strand 3	A	304	311	anti-parallel
Strand 4	A	318	324	anti-parallel
Strand 5	A	336	340	parallel
Strand 6	A	331	333	anti-parallel

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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	293	295	first strand
Strand 2	A	394	397	anti-parallel
Strand 3	A	233	237	anti-parallel

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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	487	490	first strand
Strand 2	A	494	497	anti-parallel

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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	188	191	first strand
Strand 2	A	198	200	anti-parallel

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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	104	111	first strand
Strand 2	B	115	122	anti-parallel
Strand 3	B	125	127	anti-parallel

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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	140	146	first strand
Strand 2	B	149	155	anti-parallel

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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	256	263	first strand
Strand 2	B	268	275	anti-parallel
Strand 3	B	387	392	anti-parallel
Strand 4	B	293	300	anti-parallel
Strand 5	B	348	353	anti-parallel

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There are 6 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	282	285	first strand
Strand 2	B	379	387	anti-parallel
Strand 3	B	304	311	anti-parallel
Strand 4	B	318	324	anti-parallel
Strand 5	B	336	340	parallel
Strand 6	B	331	333	anti-parallel

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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	293	295	first strand
Strand 2	B	394	397	anti-parallel
Strand 3	B	233	237	anti-parallel

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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	487	490	first strand
Strand 2	B	494	497	anti-parallel

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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	188	191	first strand
Strand 2	B	198	200	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6I01

Analysis of interatomic Contacts of Structural Units in PDB entry:
6I01