Analysis of interatomic Contacts of Structural Units in PDB entry:
6I0O

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6I0O entry

There are 2 chains in PDB entry 6I0O (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 11	VAL 499
B	SER 11	VAL 271

There are 38 helices in PDB entry 6I0O. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	19	25	Right-handed alpha
Helix 2	AA2	A	31	33	Right-handed 310
Helix 3	AA3	A	45	49	Right-handed 310
Helix 4	AA4	A	75	85	Right-handed alpha
Helix 5	AA5	A	96	111	Right-handed alpha
Helix 6	AA6	A	126	138	Right-handed alpha
Helix 7	AA7	A	159	164	Right-handed alpha
Helix 8	AA8	A	166	171	Right-handed alpha
Helix 9	AA9	A	174	179	Right-handed alpha
Helix 10	AB1	A	193	205	Right-handed alpha
Helix 11	AB2	A	224	233	Right-handed alpha
Helix 12	AB3	A	255	267	Right-handed alpha
Helix 13	AB4	A	280	294	Right-handed alpha
Helix 14	AB5	A	306	316	Right-handed alpha
Helix 15	AB6	A	342	356	Right-handed alpha
Helix 16	AB7	A	369	379	Right-handed alpha
Helix 17	AB8	A	387	391	Right-handed 310
Helix 18	AB9	A	452	472	Right-handed alpha
Helix 19	AC1	A	475	485	Right-handed alpha
Helix 20	AC2	B	19	25	Right-handed alpha
Helix 21	AC3	B	31	33	Right-handed 310
Helix 22	AC4	B	45	49	Right-handed 310
Helix 23	AC5	B	75	85	Right-handed alpha
Helix 24	AC6	B	96	111	Right-handed alpha
Helix 25	AC7	B	126	138	Right-handed alpha
Helix 26	AC8	B	159	164	Right-handed alpha
Helix 27	AC9	B	174	179	Right-handed alpha
Helix 28	AD1	B	193	205	Right-handed alpha
Helix 29	AD2	B	224	233	Right-handed alpha
Helix 30	AD3	B	254	266	Right-handed alpha
Helix 31	AD4	B	280	294	Right-handed alpha
Helix 32	AD5	B	306	317	Right-handed alpha
Helix 33	AD6	B	342	355	Right-handed alpha
Helix 34	AD7	B	356	358	Right-handed 310
Helix 35	AD8	B	369	379	Right-handed alpha
Helix 36	AD9	B	387	392	Right-handed alpha
Helix 37	AE1	B	452	472	Right-handed alpha
Helix 38	AE2	B	475	486	Right-handed alpha

There are 10 sheets in PDB entry 6I0O. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	35	37	first strand
Strand 2	A	490	492	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	53	54	first strand
Strand 2	A	60	61	anti-parallel

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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	65	67	first strand
Strand 2	A	88	91	parallel
Strand 3	A	247	250	parallel
Strand 4	A	270	273	parallel
Strand 5	A	298	304	parallel
Strand 6	A	320	323	parallel
Strand 7	A	361	364	parallel
Strand 8	A	383	386	parallel
Strand 9	A	65	67	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	142	145	first strand
Strand 2	A	154	158	anti-parallel
Strand 3	A	180	181	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	188	189	first strand
Strand 2	A	208	212	parallel
Strand 3	A	218	223	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	35	37	first strand
Strand 2	B	490	492	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	53	54	first strand
Strand 2	B	60	61	anti-parallel

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There are 9 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	65	67	first strand
Strand 2	B	88	91	parallel
Strand 3	B	247	250	parallel
Strand 4	B	270	273	parallel
Strand 5	B	298	301	parallel
Strand 6	B	320	323	parallel
Strand 7	B	361	364	parallel
Strand 8	B	383	386	parallel
Strand 9	B	65	67	parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	142	145	first strand
Strand 2	B	154	158	anti-parallel
Strand 3	B	180	181	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	188	189	first strand
Strand 2	B	208	212	parallel
Strand 3	B	218	223	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6I0O

Analysis of interatomic Contacts of Structural Units in PDB entry:
6I0O