Analysis of interatomic Contacts of Structural Units in PDB entry:
6I0Y

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6I0Y entry

There are 36 chains in PDB entry 6I0Y (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
h	ALA 2	ILE 103
0	ALA 1	LYS 56
1	GLY 3	LYS 52
2	MET 1	LYS 46
3	PRO 1	ALA 64
4	MET 1	GLY 38
5	MET 1	ALA 148
6	SER 1	PHE 30
7	THR 9	PRO 24
8	MET 1	ALA 94
A	G 1	U 2903
B	G 2	A 119
C	ALA 1	SER 271
D	MET 1	ALA 209
E	MET 1	ALA 201
F	ALA 1	ARG 177
G	SER 1	LYS 175
H	MET 1	ARG 50
I	ALA 1	ASP 141
J	MET 1	ILE 142
K	MET 1	VAL 122
L	ARG 2	GLU 144
M	MET 1	MET 136
N	MET 1	GLU 120
O	ASP 2	PHE 117
P	SER 1	ASN 114
Q	ALA 1	ALA 117
R	MET 1	ALA 103
S	MET 1	ARG 110
T	MET 1	LEU 93
V	C 1	A 76
W	GLY 6	GLU 84
X	SER 1	TYR 77
Y	MET 1	ALA 63
Z	ALA 1	GLU 58
z	LEU 1	LEU 89

There are113 helices in PDB entry 6I0Y. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	0	8	16	Right-handed alpha
Helix 2	AA2	0	17	19	Right-handed 310
Helix 3	AA3	2	8	17	Right-handed alpha
Helix 4	AA4	2	17	23	Right-handed alpha
Helix 5	AA5	2	24	37	Right-handed alpha
Helix 6	AA6	3	6	11	Right-handed alpha
Helix 7	AA7	3	36	43	Right-handed alpha
Helix 8	AA8	3	53	61	Right-handed alpha
Helix 9	AA9	4	30	34	Right-handed 310
Helix 10	AB1	5	3	8	Right-handed alpha
Helix 11	AB2	5	8	19	Right-handed alpha
Helix 12	AB3	5	33	47	Right-handed alpha
Helix 13	AB4	5	59	64	Right-handed alpha
Helix 14	AB5	5	94	104	Right-handed alpha
Helix 15	AB6	5	133	138	Right-handed 310
Helix 16	AB7	5	139	148	Right-handed alpha
Helix 17	AB8	6	3	7	Right-handed 310
Helix 18	AB9	6	15	20	Right-handed alpha
Helix 19	AC1	6	24	29	Right-handed alpha
Helix 20	AC2	7	11	16	Right-handed alpha
Helix 21	AC3	7	16	22	Right-handed alpha
Helix 22	AC4	8	13	23	Right-handed alpha
Helix 23	AC5	8	44	52	Right-handed alpha
Helix 24	AC6	8	54	59	Right-handed alpha
Helix 25	AC7	C	29	31	Right-handed 310
Helix 26	AC8	C	130	134	Right-handed 310
Helix 27	AC9	C	197	202	Right-handed 310
Helix 28	AD1	C	206	212	Right-handed alpha
Helix 29	AD2	C	220	224	Right-handed 310
Helix 30	AD3	C	262	264	Right-handed 310
Helix 31	AD4	D	56	60	Right-handed 310
Helix 32	AD5	D	61	70	Right-handed alpha
Helix 33	AD6	D	97	102	Right-handed 310
Helix 34	AD7	E	15	20	Right-handed alpha
Helix 35	AD8	E	24	37	Right-handed alpha
Helix 36	AD9	E	97	113	Right-handed alpha
Helix 37	AE1	E	130	142	Right-handed alpha
Helix 38	AE2	E	154	160	Right-handed alpha
Helix 39	AE3	E	176	183	Right-handed alpha
Helix 40	AE4	E	189	200	Right-handed alpha
Helix 41	AE5	F	2	9	Right-handed alpha
Helix 42	AE6	F	11	20	Right-handed alpha
Helix 43	AE7	F	23	27	Right-handed 310
Helix 44	AE8	F	40	44	Right-handed 310
Helix 45	AE9	F	46	60	Right-handed alpha
Helix 46	AF1	F	91	105	Right-handed alpha
Helix 47	AF2	F	133	137	Right-handed 310
Helix 48	AF3	F	141	145	Right-handed 310
Helix 49	AF4	F	161	171	Right-handed alpha
Helix 50	AF5	G	61	81	Right-handed alpha
Helix 51	AF6	G	136	150	Right-handed alpha
Helix 52	AF7	H	9	13	Right-handed 310
Helix 53	AF8	H	22	29	Right-handed alpha
Helix 54	AF9	H	30	34	Right-handed 310
Helix 55	AG1	I	23	28	Right-handed 310
Helix 56	AG2	I	33	37	Right-handed 310
Helix 57	AG3	I	40	44	Right-handed 310
Helix 58	AG4	I	106	111	Right-handed alpha
Helix 59	AG5	I	112	116	Right-handed 310
Helix 60	AG6	I	122	132	Right-handed alpha
Helix 61	AG7	J	7	11	Right-handed 310
Helix 62	AG8	J	26	38	Right-handed alpha
Helix 63	AG9	J	58	62	Right-handed 310
Helix 64	AH1	J	67	72	Right-handed alpha
Helix 65	AH2	J	88	95	Right-handed alpha
Helix 66	AH3	J	98	107	Right-handed alpha
Helix 67	AH4	J	112	120	Right-handed alpha
Helix 68	AH5	J	132	136	Right-handed 310
Helix 69	AH6	K	71	75	Right-handed 310
Helix 70	AH7	K	104	108	Right-handed 310
Helix 71	AH8	K	112	118	Right-handed alpha
Helix 72	AH9	L	21	26	Right-handed alpha
Helix 73	AI1	L	56	61	Right-handed alpha
Helix 74	AI2	L	70	72	Right-handed 310
Helix 75	AI3	L	82	86	Right-handed 310
Helix 76	AI4	L	128	137	Right-handed alpha
Helix 77	AI5	M	43	58	Right-handed alpha
Helix 78	AI6	M	109	122	Right-handed alpha
Helix 79	AI7	N	13	32	Right-handed alpha
Helix 80	AI8	N	38	56	Right-handed alpha
Helix 81	AI9	N	59	69	Right-handed alpha
Helix 82	AJ1	N	72	82	Right-handed alpha
Helix 83	AJ2	N	82	87	Right-handed alpha
Helix 84	AJ3	O	4	22	Right-handed alpha
Helix 85	AJ4	O	55	60	Right-handed alpha
Helix 86	AJ5	O	67	85	Right-handed alpha
Helix 87	AJ6	O	103	113	Right-handed alpha
Helix 88	AJ7	P	2	10	Right-handed alpha
Helix 89	AJ8	P	52	55	Right-handed 310
Helix 90	AJ9	P	77	81	Right-handed 310
Helix 91	AK1	P	96	102	Right-handed 310
Helix 92	AK2	P	103	107	Right-handed 310
Helix 93	AK3	Q	6	20	Right-handed alpha
Helix 94	AK4	Q	25	30	Right-handed alpha
Helix 95	AK5	Q	30	71	Right-handed alpha
Helix 96	AK6	Q	74	85	Right-handed alpha
Helix 97	AK7	Q	93	95	Right-handed 310
Helix 98	AK8	Q	96	101	Right-handed alpha
Helix 99	AK9	Q	101	117	Right-handed alpha
Helix 100	AL1	S	20	24	Right-handed 310
Helix 101	AL2	S	28	38	Right-handed alpha
Helix 102	AL3	S	41	62	Right-handed alpha
Helix 103	AL4	T	17	24	Right-handed alpha
Helix 104	AL5	T	40	50	Right-handed alpha
Helix 105	AL6	T	51	53	Right-handed 310
Helix 106	AL7	X	53	62	Right-handed alpha
Helix 107	AL8	X	62	72	Right-handed alpha
Helix 108	AL9	Y	9	23	Right-handed alpha
Helix 109	AM1	Y	23	34	Right-handed alpha
Helix 110	AM2	Y	40	59	Right-handed alpha
Helix 111	AM3	Z	16	27	Right-handed alpha
Helix 112	AM4	Z	40	50	Right-handed alpha
Helix 113	AM5	Z	51	54	Right-handed 310

There are 53 sheets in PDB entry 6I0Y. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6, AF7, AF8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	h	65	66	first strand
Strand 2	h	33	36	anti-parallel
Strand 3	h	22	29	anti-parallel
Strand 4	h	10	13	anti-parallel
Strand 5	h	70	72	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	h	41	46	first strand
Strand 2	h	57	62	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	h	83	88	first strand
Strand 2	h	91	96	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	0	27	29	first strand
Strand 2	0	36	38	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	0	47	48	first strand
Strand 2	0	51	52	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	1	19	24	first strand
Strand 2	1	6	12	anti-parallel
Strand 3	1	44	49	anti-parallel
Strand 4	1	35	39	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	17	19	first strand
Strand 2	4	22	24	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	8	62	65	first strand
Strand 2	8	3	8	parallel
Strand 3	8	38	43	anti-parallel
Strand 4	8	25	31	anti-parallel
Strand 5	8	86	93	parallel
Strand 6	8	72	79	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2	4	first strand
Strand 2	C	16	18	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	33	34	first strand
Strand 2	C	61	62	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	74	75	first strand
Strand 2	C	115	116	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	79	81	first strand
Strand 2	C	90	92	anti-parallel
Strand 3	C	102	103	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	162	165	first strand
Strand 2	C	171	174	anti-parallel
Strand 3	C	180	183	anti-parallel
Strand 4	C	266	268	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	12	15	first strand
Strand 2	D	21	28	anti-parallel
Strand 3	D	186	189	anti-parallel
Strand 4	D	177	181	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	12	15	first strand
Strand 2	D	21	28	anti-parallel
Strand 3	D	4	8	anti-parallel
Strand 4	D	200	203	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	33	38	first strand
Strand 2	D	47	51	anti-parallel
Strand 3	D	80	83	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	65	68	first strand
Strand 2	F	83	90	anti-parallel
Strand 3	F	30	36	anti-parallel
Strand 4	F	152	157	anti-parallel
Strand 5	F	129	130	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	8	9	first strand
Strand 2	G	48	53	anti-parallel
Strand 3	G	40	43	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	22	24	first strand
Strand 2	G	34	36	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	86	87	first strand
Strand 2	G	129	134	anti-parallel
Strand 3	G	120	123	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	94	95	first strand
Strand 2	G	104	105	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	101	102	first strand
Strand 2	G	114	115	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	4	5	first strand
Strand 2	H	36	37	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	58	59	first strand
Strand 2	I	67	68	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	122	123	first strand
Strand 2	J	54	57	parallel
Strand 3	J	16	19	parallel
Strand 4	J	138	139	parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	75	77	first strand
Strand 2	J	84	86	anti-parallel

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There are 7 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	92	94	first strand
Strand 2	K	83	88	anti-parallel
Strand 3	K	57	64	anti-parallel
Strand 4	K	38	43	anti-parallel
Strand 5	K	18	24	anti-parallel
Strand 6	K	5	10	anti-parallel
Strand 7	K	83	88	parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	76	79	first strand
Strand 2	P	69	74	anti-parallel
Strand 3	P	57	61	anti-parallel
Strand 4	P	45	49	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	74	76	first strand
Strand 2	L	107	109	parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	89	91	first strand
Strand 2	L	121	123	parallel
Strand 3	L	141	143	parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	63	65	first strand
Strand 2	M	101	105	anti-parallel
Strand 3	M	31	34	anti-parallel
Strand 4	M	129	132	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	39	42	first strand
Strand 2	M	93	96	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	74	75	first strand
Strand 2	M	88	89	anti-parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	33	37	first strand
Strand 2	N	110	115	anti-parallel
Strand 3	N	95	98	anti-parallel

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There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	47	50	first strand
Strand 2	O	35	40	anti-parallel
Strand 3	O	25	30	anti-parallel
Strand 4	O	91	93	parallel

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There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	37	43	first strand
Strand 2	P	26	32	anti-parallel
Strand 3	P	82	84	anti-parallel

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There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	11	14	first strand
Strand 2	R	2	6	anti-parallel
Strand 3	R	38	42	anti-parallel
Strand 4	R	46	48	anti-parallel

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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	20	23	first strand
Strand 2	R	92	96	anti-parallel
Strand 3	R	59	68	anti-parallel
Strand 4	R	32	35	anti-parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	R	72	78	first strand
Strand 2	R	83	89	anti-parallel

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There are 3 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	4	11	first strand
Strand 2	S	100	108	anti-parallel
Strand 3	S	70	78	anti-parallel

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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	82	83	first strand
Strand 2	S	97	98	anti-parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	S	86	88	first strand
Strand 2	S	92	94	anti-parallel

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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	11	14	first strand
Strand 2	T	32	34	anti-parallel

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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	61	63	first strand
Strand 2	T	80	82	anti-parallel

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There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	T	67	68	first strand
Strand 2	T	75	76	anti-parallel

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There are 2 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	49	50	first strand
Strand 2	W	59	60	anti-parallel

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There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	65	66	first strand
Strand 2	W	81	82	anti-parallel

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There are 2 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	X	12	14	first strand
Strand 2	X	26	28	anti-parallel

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There are 2 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	X	35	38	first strand
Strand 2	X	45	48	anti-parallel

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There are 3 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Z	35	37	first strand
Strand 2	Z	4	7	anti-parallel
Strand 3	Z	55	57	anti-parallel

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There are 3 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	z	11	13	first strand
Strand 2	z	82	86	parallel
Strand 3	z	69	71	anti-parallel

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There are 3 strands in AF7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	z	19	24	first strand
Strand 2	z	55	60	anti-parallel
Strand 3	z	47	51	anti-parallel

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There are 2 strands in AF8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	z	74	75	first strand
Strand 2	z	78	79	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6I0Y

Analysis of interatomic Contacts of Structural Units in PDB entry:
6I0Y