Analysis of interatomic Contacts of Structural Units in PDB entry:
6I1A


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6I1A entry

There are 2 chains in PDB entry 6I1A (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 29ASN 386
B
 SER 29ASN 386
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 6I1A. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
54 62Right-handed alpha
Helix 2
AA2
A
67 76Right-handed alpha
Helix 3
AA3
A
78 90Right-handed alpha
Helix 4
AA4
A
92 102Right-handed alpha
Helix 5
AA5
A
112 116Right-handed 310
Helix 6
AA6
A
128 145Right-handed alpha
Helix 7
AA7
A
162 166Right-handed 310
Helix 8
AA8
A
176 196Right-handed alpha
Helix 9
AA9
A
199 201Right-handed 310
Helix 10
AB1
A
217 221Right-handed 310
Helix 11
AB2
A
223 227Right-handed 310
Helix 12
AB3
A
228 250Right-handed alpha
Helix 13
AB4
A
263 269Right-handed alpha
Helix 14
AB5
A
295 307Right-handed alpha
Helix 15
AB6
A
329 331Right-handed 310
Helix 16
AB7
A
332 348Right-handed alpha
Helix 17
AB8
A
370 375Right-handed alpha
Helix 18
AB9
A
375 382Right-handed alpha
Helix 19
AC1
B
54 62Right-handed alpha
Helix 20
AC2
B
67 76Right-handed alpha
Helix 21
AC3
B
78 90Right-handed alpha
Helix 22
AC4
B
92 102Right-handed alpha
Helix 23
AC5
B
112 116Right-handed 310
Helix 24
AC6
B
128 145Right-handed alpha
Helix 25
AC7
B
162 166Right-handed 310
Helix 26
AC8
B
176 196Right-handed alpha
Helix 27
AC9
B
199 201Right-handed 310
Helix 28
AD1
B
217 221Right-handed 310
Helix 29
AD2
B
223 227Right-handed 310
Helix 30
AD3
B
228 250Right-handed alpha
Helix 31
AD4
B
263 268Right-handed alpha
Helix 32
AD5
B
269 271Right-handed 310
Helix 33
AD6
B
295 307Right-handed alpha
Helix 34
AD7
B
332 348Right-handed alpha
Helix 35
AD8
B
369 375Right-handed alpha
Helix 36
AD9
B
375 382Right-handed alpha
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There are 4 sheets in PDB entry 6I1A. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
203 206first strand
Strand 2
A
147 152parallel
Strand 3
A
106 111parallel
Strand 4
A
38 42parallel
Strand 5
A
350 353parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
255 257first strand
Strand 2
A
277 285parallel
Strand 3
A
315 324parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
203 206first strand
Strand 2
B
147 152parallel
Strand 3
B
106 111parallel
Strand 4
B
38 42parallel
Strand 5
B
350 353parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
255 257first strand
Strand 2
B
277 285parallel
Strand 3
B
315 324parallel
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